Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1536 ATGCATCAAGATATGGCGGAGGACGAGTCCCGCTCCTTGGAGTTCACATCTACATGGATAGTAGCTGCTGTTTGCTCCATCATTGTTCTGGTATCTTTTGCTGCAGAGCGTGGTCTTCATCGACTTGGAAAGTTGTTGTTACATAAAAGTCAAGACGCACTGTTTGAGGCCTTACAAAAATTAAAAGAAGAACTGATGCTGTTGGGGTTTATTTCCCTTCTATTAACGGTTACCCAAGGTCCAATAACCAAGATATGCATTCCTGATGATGCTGCATCTCACATGCTTCCCTGCAAAATGCCCACTAGCCACGTTTCAGAGAGCTACCACCGTCGCTATCCTCCTCAAACTGTAAACGGTATCGGAAAACGGCTTTTGCTTGAGAGTAGTACTGGCCAGCATTGTGCCCAGGGGAAAGTTCCTTTGTTATCACTAGAAGCATTGCACCATTTGCACATTTTCATCTTTGTATTGGCAGTAGTTCATGTGATCTTCTGTTGCACCACCATGGTTCTTGGAGGGGCAAAGATACGCCAATGGAAGAAGTGGGAGGATTCAATTAGGAATGAACCTATTTCAAGAAGAAATGGTGACATATTCATGATATCTTTGATTGTAGTATACCTCTCACTCTTCAACTCATTTAAACAAAACTTATACCATGCATCTGCAGAGTCTGTCCCAGAGCTTGCCGAGAGAAAGGAAACTTTACATTGGAGGAAGTCGGCTATAGTAAGTTGGATGATGTCATTCTTCAAACAATTTTATGGCTCTGTAACCAAGTCAGACTACATTACACTGCGAGAAGGATTTATAGCGGCCCATTGTGCTTCAAATCCTAAATTTGATTTTCATAATTACATGATGAGAACACTTGAAGTTGATTTCAAAAAAGTTGTGGGCATAAGCTGGTACCTATGGCTTTTTGTGGTGTTCTTTCTGCTGCTAGATGTGGAAGGGTGGCACACATATTTTTGGCTGGCTTTTCTACCCTTGATTCTTCTACTTCTTGTGGGTGCTAAGTTAGAACACATCATCACCCGTTTAGCTCAGGAGGTTGACGAGGAAAAGGCAAAGGGCCATGAAGCAAGAGTGAAGCCGTCTGATGAACATTTTTGGTTTCGTCGTCCAAGCATTGTTCTTTACTTGATTCACTTCATTCTGTTTCAGAATTCATTTGAGATTGCCTTCTTCTTCTGGATCTGGAGCACATATGGATTCAATTCTTGCATCATGGAAAAATTGGGCTACATCATCCCAAGACTTTTAATGGGTGCGCTTGTTCAAGTGCTCTGCAGTTACAGTACTTTACCTTTGTATGTCATCGTAACCCAGATGGGTAGCATGTTCAAGGAAGGCATGTTTCATCAACACGTGCACCAATCTATACTTGGTTGGGCTCACGGGCATTCAAATGAATAA 1422 0.4219 MHQDMAEDESRSLEFTSTWIVAAVCSIIVLVSFAAERGLHRLGKLLLHKSQDALFEALQKLKEELMLLGFISLLLTVTQGPITKICIPDDAASHMLPCKMPTSHVSESYHRRYPPQTVNGIGKRLLLESSTGQHCAQGKVPLLSLEALHHLHIFIFVLAVVHVIFCCTTMVLGGAKIRQWKKWEDSIRNEPISRRNGDIFMISLIVVYLSLFNSFKQNLYHASAESVPELAERKETLHWRKSAIVSWMMSFFKQFYGSVTKSDYITLREGFIAAHCASNPKFDFHNYMMRTLEVDFKKVVGISWYLWLFVVFFLLLDVEGWHTYFWLAFLPLILLLLVGAKLEHIITRLAQEVDEEKAKGHEARVKPSDEHFWFRRPSIVLYLIHFILFQNSFEIAFFFWIWSTYGFNSCIMEKLGYIIPRLLMGALVQVLCSYSTLPLYVIVTQMGSMFKEGMFHQHVHQSILGWAHGHSNE* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1536 473 Pfam Mlo family 11 469 IPR004326 GO:0006952|GO:0016020
Vvi12g1536 473 PANTHER MLO-LIKE PROTEIN 1 8 468 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1536 Vvi-Chr12 22584314 22592055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1536 9 468 MLO family AT4G02600 55.297 2.58e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1536 K08472 K01179 vvi:100233057 858.981