Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1524 ATGCAATTACATGGTCTAATGCCAAATGTATGTGCCGTAGAAGGAAGCTTTTGTCAAAAATTTAATGCTGCAAAGGTTATTTCCAGACATGATGAACTTGTTCATTATCACTTGCAGGCCGATTTGTTTCTAGCACCCCAGATTCATGCTGCACTTAAATGGTTCAAAGTGGACATGACTGAATTTCCCCTTTTATTAAGGTTGAATGATGCATACAATGAATTGCCAGCATTCCAAGATGCTATGAAAGAAAAACAGCCCGACTATGTCCCATCATAG 279 0.3871 MQLHGLMPNVCAVEGSFCQKFNAAKVISRHDELVHYHLQADLFLAPQIHAALKWFKVDMTEFPLLLRLNDAYNELPAFQDAMKEKQPDYVPS* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1524 92 SUPERFAMILY GST C-terminal domain-like 40 89 IPR036282 -
Vvi12g1524 92 PANTHER MALEYLACETOACETATE ISOMERASE 40 88 - -
Vvi12g1524 92 Gene3D - 26 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1524 Vvi-Chr12 22359026 22360142 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1524 40 88 Glutathione S-transferase Gene Family AT2G02380 65.306 1.70e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1524 K01800 - vvi:100252270 103.605