Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1460 ATGATTCCTTTGTCTGAAATCCTTGCAACCAATGATTATTCAGCAAGTTGCAGTTCTTCTCGAGCTGCTGAGCTTGAGCAAAAGCAAGATATCGGTAATATTAAAGAAGCTGAATCATCTCTCCATGAGAGTAGTTGTTTAAACTACGAGGAAGCAAGAGCATTGTTAGGGAGATATGAATATCAAAAAGGGAACATAGAAGCTGCTCTGCATGTATTTGAAGGAATAGATATTGCTGCAGTGACTCCCAAGATGAAACTCACCCTCGCTAAGAGAGGAGAACGTCGTAAGGAGGCGCTCTCAAAGTGA 309 0.4142 MIPLSEILATNDYSASCSSSRAAELEQKQDIGNIKEAESSLHESSCLNYEEARALLGRYEYQKGNIEAALHVFEGIDIAAVTPKMKLTLAKRGERRKEALSK* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1460 102 PANTHER PROTEIN NPG1 2 98 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1460 Vvi-Chr12 21292730 21293038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1460 5 102 Calmodulin-binding Proteins AT4G28600 59.596 9.77e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1460 K21843 K12178 vvi:100242030 199.134