Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1338 ATGGAGGTAGGAAGGTCTCTGGCGGAGACTCCAACCTGGGCAGTTGCATCAGTTGTCACTGTTATGGTTTTTGTTTGCTTTCTGGTTGAAAGATCCATTTACAGATTCGGGAAGGGTCTGATCTTTTCAATGTGGTTTGTTGTTCAGTGGCTGAAGAAGACTAGGAGGAAGGCTCTGTTTTCTTCTCTGGAGAAGATTAAGGAAGAGCTGATGCTGCTTGGGCTCATATCTCTGATGTTGGGACAATGGGCAAGGTGGATTTCCGAGATTTGTGTAGATTCATCTCTTTTCAACAGCAAATTCTATCTTTGTTCCGAGCAAGATTTTAACATCAATGAGAATGTATGGTTTATGAAATCATTCTCATTTTCAAATGACACTAACATTCCCCCAAATGGAGCCAATGCCGTTCCATCTCATCAATGTGGTGAGGGCCGTGTACCGTTTGTTTCCCAAGAAGGTCTAGAGCAGCTTCACCGGTTTCTGTTTGTTCTTGGCATTACCCATGTCGTGTATAGTTGTATGGCGGTTGGTCTGTCCATGAGCAAGATTTACAGTTGGAGAAAGTGGGAAAATCAGGCAACCCTAGTTGCTGATGGGAGCTTGCAAGCAAAGGTAAACAAAGAGATGAGGAGACAATCCACCTTTGTTTTCCATCACACATCACACCCATGGAGCAGGAGCCGCATTCTCATTTGGATGCTTTGTTTTCTAAGACAATTCAAGAGGTCTATACAGAAATCTGATTACTTAGCACTGCGTTTGGGTTTCATCACTAATCACAAACTCCCGCTTTCTTATAATTTCCATAAGTATATGGTTCGGAGCATGGAAGATGAATTTCATGGAATTGTGGGGATTAGCTGGCCACTTTGGGGGTATGCCATAATCTGCATTTTCATAAATATTCATGGACTGAATATTTACTTCTGGCTTTCTTTCATTCCTGCCATTCTGATGGTGCTGGTTGGAACAAAGCTCCAGCATGTTGTCTCCTTGCTAGCTCTTGAAATTGGAGAACAACAAGGCCCACAGGTTGGAACTCAAGTAAAGCCACGGGATGAGCTGTTTTGGTTTGGAAAACCAGAAATATTGTTACGGTTGATACAATTTATCATATTTCAGAATGCCTTTGAGATGGCAACATTCATCTGGTCTTGGTGGGGATTTAAGCAGCAATCGTGCTTCATGAAGAACCATGTAACGATAATCATCCGATTGTCTTCTGGGGTTCTTGTTCAGTTCTGGTGTAGCTATTGCACTGTGCCTCTGAACGTAATTATCACACAGATGGGATCTCGATGCAAGAAAGCCTTAGTTGCTGAAAGTGTAAGAGAATCACTACACAGCTGGTGTAAGAGAGTCAAAGAGAAGTCTAGGCGCGACTCTATGAACTCCAGAGCTACACGGTCAGTCTGCTCACTTGAATCAACCATTGATGAGAGGGATGAGATCATCACAGTTGGATCAGGCACTCTAGGATCTGGTACCCTGTCTCGCTGTTCATCCTTAGGCTCACTGAATGAGGAAATCATAGTACCAACCCAACAGCTAGAGGGTGATTTTGAGAGCTCGGCCGCACCCCAGTATGACAATTCATTCAGGCATAGCTCATCACAATCAACCATCAATGTTGCAACCGATGATGTTGCAGATGAGGAGGAAGAAAAAGTGCAGACTCTTTTGGATTTGTTACAAAAGACATGA 1707 0.4335 MEVGRSLAETPTWAVASVVTVMVFVCFLVERSIYRFGKGLIFSMWFVVQWLKKTRRKALFSSLEKIKEELMLLGLISLMLGQWARWISEICVDSSLFNSKFYLCSEQDFNINENVWFMKSFSFSNDTNIPPNGANAVPSHQCGEGRVPFVSQEGLEQLHRFLFVLGITHVVYSCMAVGLSMSKIYSWRKWENQATLVADGSLQAKVNKEMRRQSTFVFHHTSHPWSRSRILIWMLCFLRQFKRSIQKSDYLALRLGFITNHKLPLSYNFHKYMVRSMEDEFHGIVGISWPLWGYAIICIFINIHGLNIYFWLSFIPAILMVLVGTKLQHVVSLLALEIGEQQGPQVGTQVKPRDELFWFGKPEILLRLIQFIIFQNAFEMATFIWSWWGFKQQSCFMKNHVTIIIRLSSGVLVQFWCSYCTVPLNVIITQMGSRCKKALVAESVRESLHSWCKRVKEKSRRDSMNSRATRSVCSLESTIDERDEIITVGSGTLGSGTLSRCSSLGSLNEEIIVPTQQLEGDFESSAAPQYDNSFRHSSSQSTINVATDDVADEEEEKVQTLLDLLQKT* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1338 568 MobiDBLite consensus disorder prediction 526 551 - -
Vvi12g1338 568 Pfam Mlo family 5 479 IPR004326 GO:0006952|GO:0016020
Vvi12g1338 568 PANTHER MLO-LIKE PROTEIN 1 1 497 IPR004326 GO:0006952|GO:0016020
Vvi12g1338 568 MobiDBLite consensus disorder prediction 526 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1338 Vvi-Chr12 19503898 19514536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1338 1 529 MLO family AT1G11000 69.476 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1338 K08472 - vvi:100233067 1058.13