Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1184 ATGCAGAGGCTTGAAGAAAAGTTTTCTGATGTCAAATCTGAGAATCAAACTCTTCGGCAGCGAGCCTTGTTAAAGACACCCATAAAACGCATTGCAGATATTCTTTCAACTCCGGAAAAGAATCAAAGTTTGGAAAATGGTCATCACTTGAGTGAAGAGAACGGAGCTAATGAACCAATAAATGCAACGCCTATTAAGGAGGTTAAGACAGACTCAGAGAGCAAGATGAGGAAATCCCATATTGAACACCAGTATGATGATATTGATACCCTGATTAAATGTGTTCCAAAAGATATTAGCTTCAGTCAAGGAAAGCCTGCTGCAGCATTTACAATCTATAAATGTCCTCTCCAGTGGAAACCTTTTATGGCTGGAAATGGGCATCCCAGAAGAAATTCCCTGCCGATCAGTTGGCCCAAATGA 423 0.4066 MQRLEEKFSDVKSENQTLRQRALLKTPIKRIADILSTPEKNQSLENGHHLSEENGANEPINATPIKEVKTDSESKMRKSHIEHQYDDIDTLIKCVPKDISFSQGKPAAAFTIYKCPLQWKPFMAGNGHPRRNSLPISWPK* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1184 140 MobiDBLite consensus disorder prediction 36 79 - -
Vvi12g1184 140 Coils Coil 1 21 - -
Vvi12g1184 140 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1184 Vvi-Chr12 17295097 17295519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1184 1 122 Myosins gene family AT1G04160 45.082 9.79e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1184 K10357 - vvi:100256590 215.312