Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1182 ATGCCTCCAACTTTTTCAAGAATTCAGGGTAACCCTGGTTTATCTACTCGGTATAACGCTGTTGTTCCTGGAAGTAGCATTCCTGAGTGGTTCATCAATCAGAGCACGGGGTGTTTAGTAACTGTAGAGCTGCCTCCACATTGGTATAACACCAAGTTGATGGGATTGGCTGTTTGCGCTGTTTTCAACGCACACATCACCATGGGTGAGTTGGATGAGTTGGGCGAGTTTATATGTTTTAGTGTGAATGAATCTGGCAGCTTCTATATCGATGACACGGCTTGCATGCATTTTTCAAAAGCTGACCACATCTGGTTTGGTTATCGACCACTTGCTGACCCTGGTGGTCCGTTTAGAAACCAGAGCAACACTTTGAAGGTTTCGTTTTCTGTATCCAACAGTGACGCGGAAGGCTTGAAAAAGTGTGGGGTTCGTGCAGGATATGAGTTCTTTGCTTTCATACCAAGTCCATCTTCTCTCTCCCATTTCACTCCCTTGAAGTCTTTCTCTGTCATTTTTCACTCTGTGAAAAGTGAGTGTTGTAGTTGTAATAAATGTCCTAAGGTCTGCAAGGGTCGGTTTTCTAATGGAAGCATTTGTAAGCTGACGTCTTGTCAGACTAATACTCTCTCTGGTTGCTCAGAACTGAAGAAATTGCCAGATGACATGGGGAGGCTACAATGTTTAGTAAAGTACAAAGCAAATGGAAGTGGTATACAAGAGGTACCCACCTCTATTACTCTTTTGACAAAGCTTCAAGTATTATCATTAGCAGGATGTAAGGGAGGGGAATCCAAGTCAAGGAATCTGGTTTTATCTTTGCCCTCATCACCAACAGAAGGATTTCTTTGTCGGGTCTATGCTCCTTGA 870 0.4333 MPPTFSRIQGNPGLSTRYNAVVPGSSIPEWFINQSTGCLVTVELPPHWYNTKLMGLAVCAVFNAHITMGELDELGEFICFSVNESGSFYIDDTACMHFSKADHIWFGYRPLADPGGPFRNQSNTLKVSFSVSNSDAEGLKKCGVRAGYEFFAFIPSPSSLSHFTPLKSFSVIFHSVKSECCSCNKCPKVCKGRFSNGSICKLTSCQTNTLSGCSELKKLPDDMGRLQCLVKYKANGSGIQEVPTSITLLTKLQVLSLAGCKGGESKSRNLVLSLPSSPTEGFLCRVYAP* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1182 289 SUPERFAMILY RNI-like 157 265 - -
Vvi12g1182 289 Gene3D Ribonuclease Inhibitor 144 279 IPR032675 -
Vvi12g1182 289 Pfam C-JID domain 22 150 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1182 Vvi-Chr12 17276641 17280430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1182 198 255 WRKY Transcription Factor Family AT4G12020 41.379 9.33e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1182 - - vvi:104880986 162.54