Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1146 ATGCAGCATGCCTTTGCCATGTATGCCTCTAAGACGAGGGGAGGGGGCTTGGATCCCGACCAGCAGACTCGTCGAAGGGTGGGGGGCATAGCGGGTATGTTCCTGAGGGGGTTGAAACCTCAGGGCACTTGGAATGCAGCATGCCTTTGCCATATGCAAGCGTTATTTAGGATTGGCAAGGGTGAACCTCCTCCTGTTTCTAATTCCTTGTCATCAGATGCCCGAGATTCTATCCTCAAATGCTTGCAAGTCAACCCTGGTGATGGGCCTACTGGTCAGTTACTGGACCATTCATTTGTCAGGAGCCCACAACACACTTTCTCTGGCCCTCAATCTCCTCGTACAAATGGAATACGACCTTAA 363 0.5152 MQHAFAMYASKTRGGGLDPDQQTRRRVGGIAGMFLRGLKPQGTWNAACLCHMQALFRIGKGEPPPVSNSLSSDARDSILKCLQVNPGDGPTGQLLDHSFVRSPQHTFSGPQSPRTNGIRP* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1146 120 MobiDBLite consensus disorder prediction 97 120 - -
Vvi12g1146 120 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 48 110 - -
Vvi12g1146 120 Gene3D Transferase(Phosphotransferase) domain 1 25 112 - -
Vvi12g1146 120 MobiDBLite consensus disorder prediction 85 120 - -
Vvi12g1146 120 SUPERFAMILY Protein kinase-like (PK-like) 50 108 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1146 52 103 MAP Kinase Kinase Kinase AT4G08500 60.377 4.55e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1146 - K13414 vvi:100241228 121.709