Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1127 ATGTGTTTGTGTGTTTTTGATTTCATTAACTTTGAATTTAATCCTGATGGATTATTTTTTGCTGTGAAGGAGGTTTCATTGCTTGATAAAGGGAAGTGGGGCAAACAAGGCATTTATCAACTTGAACAAGAGATTTCTCTTTTAAGTCAGTTGGAACATGAGAACATAGTTCGGTATTATGGCACAGACAAGGTATGTTTCTTACACCTTGAGTCAGCTTCTTTTGTTTTCTTGTAA 237 0.346 MCLCVFDFINFEFNPDGLFFAVKEVSLLDKGKWGKQGIYQLEQEISLLSQLEHENIVRYYGTDKVCFLHLESASFVFL* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1127 78 Gene3D Phosphorylase Kinase; domain 1 11 72 - -
Vvi12g1127 78 SUPERFAMILY Protein kinase-like (PK-like) 14 63 IPR011009 -
Vvi12g1127 78 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 13 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1127 Vvi-Chr12 16322082 16331789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1127 16 64 MAP Kinase Kinase Kinase AT4G08480 71.429 1.04e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1127 - K13414 vvi:109123488 93.5893