Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1097 ATGGACTCAAAGCACAAGCAGAAGCTGCTGAAGCCGAAGCTGGATCGGCGCAACGCCATCAAGAACATTGACTACGACGCCTCCACCTCCGACGATGCCACCACTCTACGCACCCGCTCTCTCGACCTCTCTCCTATCTCCTCCCGCACCAGCTTCCGAATCCAAGGCAGCGCCGCCGAGTTCGACCAAATCTGCCGCAGCCTCGGCCTCTCCGGCCCGGAGGATTTTGCCATTCCAGCCGCCGCTTGGGAGGCCAGGAAGGCCCTGTCATCGCCTAATCTCCTTCCCAGGTCTCGCTCTGATCCTCCGGAGAAGCAGCCGGTGGCGGAGGAGGTGAGCAGAGAGTTTGGAACTAGGGTTAGGGTTAGGTTCGCTGATAAAATTGAGGATGGAAATGAAAATGAAAGGGATAGTGAGAATGAATTGAATTGTGTTGATTTAAATTCAGTTAGAAGTGGCGGAGGCGGAATCAAGGGGGTCCGGCCGCCTCCGGTTCTTGCGCCTCCGCCAGTGATGAGGCGGCCGGTGGTGGATAATGTGAGCTCAACTTGGGATTTGTTGAAGTCCTTTGCTCCTCAAGGTGATGAACCTTTGGATTCGCTGCGTGGTGGTTCCAAAGTTGCTAGCTCTTCGGACGAAGAGGATGTGGTAATTGAGAGAAATAACGTTAATGGAGGGAATGCTGGGATAGGAGAATCTCGTTTTTTTCCTCGAAGTGACAATCATATGGATTCGCCGGCTCAGTCCGGAATTGTTAACCCTTCGGATGGAGAAGAGCATACGGAAATTGAGAGGAATAAGGTCGATGGGGAGAACGTCGATGGGGAGAACATTGGGACAGAAGAGTCTTGTTCTTCCACGTCAAACGATGAGGATGAGGATTCTAGCATGACTTTGGAGCCAATCTATGGGATTTCGCCAAATGGCCAATTCAAGCGCACCATCAATTCCTGGCAGAGGGGTGAGCTTCTAGGAAGTGGATCTTTTGGAACAGTGTATGAAGGCTATACTGAGTAA 1017 0.5221 MDSKHKQKLLKPKLDRRNAIKNIDYDASTSDDATTLRTRSLDLSPISSRTSFRIQGSAAEFDQICRSLGLSGPEDFAIPAAAWEARKALSSPNLLPRSRSDPPEKQPVAEEVSREFGTRVRVRFADKIEDGNENERDSENELNCVDLNSVRSGGGGIKGVRPPPVLAPPPVMRRPVVDNVSSTWDLLKSFAPQGDEPLDSLRGGSKVASSSDEEDVVIERNNVNGGNAGIGESRFFPRSDNHMDSPAQSGIVNPSDGEEHTEIERNKVDGENVDGENIGTEESCSSTSNDEDEDSSMTLEPIYGISPNGQFKRTINSWQRGELLGSGSFGTVYEGYTE* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1097 338 MobiDBLite consensus disorder prediction 92 113 - -
Vvi12g1097 338 MobiDBLite consensus disorder prediction 191 309 - -
Vvi12g1097 338 MobiDBLite consensus disorder prediction 257 274 - -
Vvi12g1097 338 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 173 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1097 Vvi-Chr12 15659353 15660369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1097 281 337 MAP Kinase Kinase Kinase AT4G08500 48.276 4.47e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1097 K13414 - vvi:100241228 627.476