Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1048 ATGGCAGTTTCTACTACTAATTGCCATGGCTACTCAATTGGCTCAAGGTCACGACACGCTGACCAAATAAGCAAGCTGGAAGGTGCCCACAAGGCGGAGAGATGGTCGTGTTTCATTTCATCTGAGACTGCCAATTTGCCAGTCTTCCGTGACTCCATTGAACTTCAAAAGCAAAAGTTCATTGACAAGGGTCTCGATGATCAAGATCTTGTAGCTCTTGTTGCGGTCACACTATTGGAACTTCAGCATGCCAATTCTTTAGTGACAAACTATATAACTTCAACACGACAACTGGAAATGGTGTTGACCCCTCCATCGACCCCACCTTCCTTCCTCAGCTACAAGCTCTTTGCCCTCAAAACGAGGTTGTGGGAAGATGCCTCCACCAGGAGCTACGTGCAACGGTTCCTTAGCATCAGAGGCTTGTAG 429 0.4732 MAVSTTNCHGYSIGSRSRHADQISKLEGAHKAERWSCFISSETANLPVFRDSIELQKQKFIDKGLDDQDLVALVAVTLLELQHANSLVTNYITSTRQLEMVLTPPSTPPSFLSYKLFALKTRLWEDASTRSYVQRFLSIRGL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1048 142 SUPERFAMILY Heme-dependent peroxidases 42 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1048 Vvi-Chr12 14627943 14636265 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1048 39 142 Peroxidase AT2G41480 29.078 3.68e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1048 K00430 - vvi:100267515 67.781