Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1047 ATGGCTGCTGCATTGGCTCAAGGCCAAGGCACGCGGGTCGGATTCTATTCCTATACCTGCCCTGAAGTCGAATCCATTGTGAAAGAGACTGTTACAGATCATTTCAATTCCAACCCAACCATTGCCCCTGGTTTGCTCCGCATGCACTTCCATGACTGCTTCGTCCGAGGTTGCGATGCTTCCATCCTCCTCACTGGCTCCTCCACTGAAAGAACTGCTGGTCCCAATAGTCTGTTGAGAGGATATGAAGTAATAGATGACGCCAAGACCCGGCTGGAAGCCGCCTGCCCTGGAGTGGTCTCATGCGCTGATATTCTTGCTCTCGCTGCCCGTGACTCTGTCCTTCTGGAATGCATATATGCATGA 366 0.5219 MAAALAQGQGTRVGFYSYTCPEVESIVKETVTDHFNSNPTIAPGLLRMHFHDCFVRGCDASILLTGSSTERTAGPNSLLRGYEVIDDAKTRLEAACPGVVSCADILALAARDSVLLECIYA* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1047 121 PRINTS Haem peroxidase superfamily signature 100 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 PRINTS Haem peroxidase superfamily signature 42 56 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 Gene3D - 12 118 - -
Vvi12g1047 121 Pfam Peroxidase 27 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 SUPERFAMILY Heme-dependent peroxidases 12 116 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 PRINTS Plant peroxidase signature 44 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 PRINTS Plant peroxidase signature 99 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 PRINTS Plant peroxidase signature 80 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 PRINTS Plant peroxidase signature 20 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 ProSitePatterns Peroxidases active site signature. 42 53 IPR019794 GO:0004601
Vvi12g1047 121 ProSiteProfiles Plant heme peroxidase family profile. 10 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1047 121 PANTHER PEROXIDASE 25-RELATED 13 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1047 Vvi-Chr12 14601504 14601869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1047 8 116 Peroxidase AT5G39580 73.394 3.33e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1047 K00430 - vvi:100267515 236.113