LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi12g1044	ATGGAGACTTCCTCATTCTTGTTTCTCTTGCTAATTGCCACGGCTGCTGCATTTGTGCAAGGCCAAGGCACTCGGGTTGGCTTCTATTCCCGTACGTGTCCTCAAGCTGAATCCATTGTTCAGAAAACTGTCCAGTCTCATTTCCAATCCAATCCAGCCATTGCCCCTGGTTTGCTTCGCATGCACTTCCATGACTGTTTTGTCCAGGGTTGCGATGCTTCCATCCTCATCGATGGGTCTTCCACCGAGAAAACAGCTGGGCCAAATCGTCTGTTGAGAGGATATGATGTTATTGACGATGCCAAGACACAGCTCGAAGCCGCTTGCCCTGGAGTGGTCTCTTGCGCTGATATTCTTGCCCTCGCTGCCCGCGACTCTGTGGTTCTGACTAAAGGACTAATGTGGAAAGTGCCTACGGGACGTAGAGACGGGCGAGTTTCATTGGCATCTGATGTTAACAATTTGCCTGGTCCTCGCGACTCTGTTGAAGTCCAGAAGCAAAAGTTTGCTGATAAGGGTCTCAATGATCAAGATCTCGTTACTCTTGTTGGAGGACACACCATTGGAACTTCAGCATGCCAAGCCTTCAGATACAGACTATACAACTTCAGTACCACGACTGCAAATGGTGCTGACCCTTCCATGGATGCCACATTCGTAACTCAGCTACAAGCCCTCTGTCCAGCTGATGGAGATGCGAGTAGACGCATTGCACTGGACACTGGTAGCTCAGATACATTTGACGCATCTTTCTTTACAAACTTGAAGAATGGACGTGGAGTACTGGAGTCTGATCAGAAGTTATGGACGGATGCTTCCACCAAAACTTTAGTTCAGCGCTTCCTGGGGGTTAGAGGGCTGCGTGGGTTGAACTTCAACGTTGAGTTTGGAAGGTCTATGGTGAAGATGAGCAACATTGGGGTGAAAACTGGCACTGAGGGTGAAATTCGCAAACTGTGCTCTGCAAATAACTAA	975	0.4872	METSSFLFLLLIATAAAFVQGQGTRVGFYSRTCPQAESIVQKTVQSHFQSNPAIAPGLLRMHFHDCFVQGCDASILIDGSSTEKTAGPNRLLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGLMWKVPTGRRDGRVSLASDVNNLPGPRDSVEVQKQKFADKGLNDQDLVTLVGGHTIGTSACQAFRYRLYNFSTTTANGADPSMDATFVTQLQALCPADGDASRRIALDTGSSDTFDASFFTNLKNGRGVLESDQKLWTDASTKTLVQRFLGVRGLRGLNFNVEFGRSMVKMSNIGVKTGTEGEIRKLCSANN*	325

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi12g1044	324	FunFam	Peroxidase	156	303	-	-
	Vvi12g1044	324	CDD	secretory_peroxidase	25	322	IPR033905	GO:0004601\|GO:0042744
	Vvi12g1044	324	ProSiteProfiles	Plant heme peroxidase family profile.	23	324	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1044	324	PRINTS	Plant peroxidase signature	112	122	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1044	324	PRINTS	Plant peroxidase signature	238	253	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1044	324	PRINTS	Plant peroxidase signature	298	311	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1044	324	PRINTS	Plant peroxidase signature	33	52	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1044	324	PRINTS	Plant peroxidase signature	57	77	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1044	324	PRINTS	Plant peroxidase signature	93	106	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1044	324	PRINTS	Plant peroxidase signature	131	146	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi12g1044	Vvi-Chr12	14513055	14514222	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi12g1044	5	324	Peroxidase	AT5G64120	62.918	1.18e-148	419

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi12g1044	K00430		-	vvi:100262265	635.565

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