Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1044 ATGGAGACTTCCTCATTCTTGTTTCTCTTGCTAATTGCCACGGCTGCTGCATTTGTGCAAGGCCAAGGCACTCGGGTTGGCTTCTATTCCCGTACGTGTCCTCAAGCTGAATCCATTGTTCAGAAAACTGTCCAGTCTCATTTCCAATCCAATCCAGCCATTGCCCCTGGTTTGCTTCGCATGCACTTCCATGACTGTTTTGTCCAGGGTTGCGATGCTTCCATCCTCATCGATGGGTCTTCCACCGAGAAAACAGCTGGGCCAAATCGTCTGTTGAGAGGATATGATGTTATTGACGATGCCAAGACACAGCTCGAAGCCGCTTGCCCTGGAGTGGTCTCTTGCGCTGATATTCTTGCCCTCGCTGCCCGCGACTCTGTGGTTCTGACTAAAGGACTAATGTGGAAAGTGCCTACGGGACGTAGAGACGGGCGAGTTTCATTGGCATCTGATGTTAACAATTTGCCTGGTCCTCGCGACTCTGTTGAAGTCCAGAAGCAAAAGTTTGCTGATAAGGGTCTCAATGATCAAGATCTCGTTACTCTTGTTGGAGGACACACCATTGGAACTTCAGCATGCCAAGCCTTCAGATACAGACTATACAACTTCAGTACCACGACTGCAAATGGTGCTGACCCTTCCATGGATGCCACATTCGTAACTCAGCTACAAGCCCTCTGTCCAGCTGATGGAGATGCGAGTAGACGCATTGCACTGGACACTGGTAGCTCAGATACATTTGACGCATCTTTCTTTACAAACTTGAAGAATGGACGTGGAGTACTGGAGTCTGATCAGAAGTTATGGACGGATGCTTCCACCAAAACTTTAGTTCAGCGCTTCCTGGGGGTTAGAGGGCTGCGTGGGTTGAACTTCAACGTTGAGTTTGGAAGGTCTATGGTGAAGATGAGCAACATTGGGGTGAAAACTGGCACTGAGGGTGAAATTCGCAAACTGTGCTCTGCAAATAACTAA 975 0.4872 METSSFLFLLLIATAAAFVQGQGTRVGFYSRTCPQAESIVQKTVQSHFQSNPAIAPGLLRMHFHDCFVQGCDASILIDGSSTEKTAGPNRLLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGLMWKVPTGRRDGRVSLASDVNNLPGPRDSVEVQKQKFADKGLNDQDLVTLVGGHTIGTSACQAFRYRLYNFSTTTANGADPSMDATFVTQLQALCPADGDASRRIALDTGSSDTFDASFFTNLKNGRGVLESDQKLWTDASTKTLVQRFLGVRGLRGLNFNVEFGRSMVKMSNIGVKTGTEGEIRKLCSANN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1044 324 FunFam Peroxidase 156 303 - -
Vvi12g1044 324 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Vvi12g1044 324 ProSiteProfiles Plant heme peroxidase family profile. 23 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 Pfam Peroxidase 40 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 Gene3D Peroxidase, domain 2 156 303 - -
Vvi12g1044 324 PANTHER PEROXIDASE 25-RELATED 12 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Vvi12g1044 324 Gene3D - 27 324 - -
Vvi12g1044 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Vvi12g1044 324 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1044 324 FunFam Peroxidase 27 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1044 Vvi-Chr12 14513055 14514222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1044 5 324 Peroxidase AT5G64120 62.918 1.18e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1044 K00430 - vvi:100262265 635.565