LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi12g1042	ATGGCTGCTGCATTGGTGCAAGGCCAAGGCACTAGGGTTGGCTTCTATTCCCGTACATGTCCTCAAGCTGAATCCATTGTTCAGAAAACTGTCAATTCCCATTTCCAGTCCAATCCAGCCATTGCCCCTGGCTTGCTTCGCATGCACTTCCATGACTGCTTTGTCCAGGGTTGCGATGCTTCCATCCTCATCGATGGGTCGTCCACCGAGAAAACGGCTGGGCCGAATCGTCTGTTGAGAGGATATGATGTTATTGACGATGCCAAGACACAGCTCGAAGCCGCTTGCCCTGGAGTGGTCTCTTGCGCTGATATTCTTGCCCTCGCTGCCCGCGACTCTGTGGTTCTGACTAAAGGACTAGTGTGGAAAGTGCCTACGGGACGTAGAGACGGGCGAGTTTCATTGGCATCTAATGTTAACAATTTGCCTGGCCCTCGCGACTCTGTTGAAGTCCAAAAGAAAAAGTTTGCTGACAAGGGTCTCAATGATCAAGATCTGGTTACTCTTGTTGGAGGACACACCATTGGAACTGCAGCATGCCAAGCCTTCAGATACAGACTATACAACTTCAGTACCACGACTGCAAATGGTGCTGACACTTCCATGGATGCCACATTCGTAACTCAGCTACAAGCCCTCTGTCCAGCTAATGGAGATGCGAGCAGACGGGTTGCACTGGACACTGGTAGCTCAAACACATTTGACGCATCATACTTTACAAACTTGAAGAATGGACGAGGAGTACTGGAATCTGATCAGAGGTTATGGACAGATGCTTCCACCAAAACTTTTGTTCAGCGCTTCCTGGGGGTTAGAGGGCTGCTTGGATTGAATTTCAACCTTGAGTTTGGAAGGTCCATGGTGAAGATGAGCAACATTGGGGTGAAGACTGGGACTCAGGGTGAAATTCGCAAAGTGTGCTCTGCAATTAACTGA	936	0.4936	MAAALVQGQGTRVGFYSRTCPQAESIVQKTVNSHFQSNPAIAPGLLRMHFHDCFVQGCDASILIDGSSTEKTAGPNRLLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGLVWKVPTGRRDGRVSLASNVNNLPGPRDSVEVQKKKFADKGLNDQDLVTLVGGHTIGTAACQAFRYRLYNFSTTTANGADTSMDATFVTQLQALCPANGDASRRVALDTGSSNTFDASYFTNLKNGRGVLESDQRLWTDASTKTFVQRFLGVRGLLGLNFNLEFGRSMVKMSNIGVKTGTQGEIRKVCSAIN*	312

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi12g1042	311	ProSiteProfiles	Plant heme peroxidase family profile.	10	311	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	Pfam	Peroxidase	27	268	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PANTHER	PEROXIDASE 25-RELATED	6	304	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PRINTS	Plant peroxidase signature	285	298	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PRINTS	Plant peroxidase signature	118	133	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PRINTS	Plant peroxidase signature	225	240	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PRINTS	Plant peroxidase signature	44	64	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PRINTS	Plant peroxidase signature	99	109	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PRINTS	Plant peroxidase signature	80	93	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi12g1042	311	PRINTS	Plant peroxidase signature	164	176	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi12g1042	Vvi-Chr12	14484623	14485753	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi12g1042	10	311	Peroxidase	AT5G64120	67.550	1.18e-150	424

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi12g1042	K00430		-	vvi:100257139	614.764

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