Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1042 ATGGCTGCTGCATTGGTGCAAGGCCAAGGCACTAGGGTTGGCTTCTATTCCCGTACATGTCCTCAAGCTGAATCCATTGTTCAGAAAACTGTCAATTCCCATTTCCAGTCCAATCCAGCCATTGCCCCTGGCTTGCTTCGCATGCACTTCCATGACTGCTTTGTCCAGGGTTGCGATGCTTCCATCCTCATCGATGGGTCGTCCACCGAGAAAACGGCTGGGCCGAATCGTCTGTTGAGAGGATATGATGTTATTGACGATGCCAAGACACAGCTCGAAGCCGCTTGCCCTGGAGTGGTCTCTTGCGCTGATATTCTTGCCCTCGCTGCCCGCGACTCTGTGGTTCTGACTAAAGGACTAGTGTGGAAAGTGCCTACGGGACGTAGAGACGGGCGAGTTTCATTGGCATCTAATGTTAACAATTTGCCTGGCCCTCGCGACTCTGTTGAAGTCCAAAAGAAAAAGTTTGCTGACAAGGGTCTCAATGATCAAGATCTGGTTACTCTTGTTGGAGGACACACCATTGGAACTGCAGCATGCCAAGCCTTCAGATACAGACTATACAACTTCAGTACCACGACTGCAAATGGTGCTGACACTTCCATGGATGCCACATTCGTAACTCAGCTACAAGCCCTCTGTCCAGCTAATGGAGATGCGAGCAGACGGGTTGCACTGGACACTGGTAGCTCAAACACATTTGACGCATCATACTTTACAAACTTGAAGAATGGACGAGGAGTACTGGAATCTGATCAGAGGTTATGGACAGATGCTTCCACCAAAACTTTTGTTCAGCGCTTCCTGGGGGTTAGAGGGCTGCTTGGATTGAATTTCAACCTTGAGTTTGGAAGGTCCATGGTGAAGATGAGCAACATTGGGGTGAAGACTGGGACTCAGGGTGAAATTCGCAAAGTGTGCTCTGCAATTAACTGA 936 0.4936 MAAALVQGQGTRVGFYSRTCPQAESIVQKTVNSHFQSNPAIAPGLLRMHFHDCFVQGCDASILIDGSSTEKTAGPNRLLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGLVWKVPTGRRDGRVSLASNVNNLPGPRDSVEVQKKKFADKGLNDQDLVTLVGGHTIGTAACQAFRYRLYNFSTTTANGADTSMDATFVTQLQALCPANGDASRRVALDTGSSNTFDASYFTNLKNGRGVLESDQRLWTDASTKTFVQRFLGVRGLLGLNFNLEFGRSMVKMSNIGVKTGTQGEIRKVCSAIN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1042 311 ProSiteProfiles Plant heme peroxidase family profile. 10 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 Pfam Peroxidase 27 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PANTHER PEROXIDASE 25-RELATED 6 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 118 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 44 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 99 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 80 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 164 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Plant peroxidase signature 20 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 Gene3D Peroxidase, domain 2 143 290 - -
Vvi12g1042 311 ProSitePatterns Peroxidases active site signature. 42 53 IPR019794 GO:0004601
Vvi12g1042 311 SUPERFAMILY Heme-dependent peroxidases 12 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 FunFam Peroxidase 14 144 - -
Vvi12g1042 311 FunFam Peroxidase 143 290 - -
Vvi12g1042 311 CDD secretory_peroxidase 12 310 IPR033905 GO:0004601|GO:0042744
Vvi12g1042 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 165 175 IPR019793 -
Vvi12g1042 311 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Haem peroxidase superfamily signature 118 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Haem peroxidase superfamily signature 42 56 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 PRINTS Haem peroxidase superfamily signature 100 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1042 311 Gene3D - 14 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1042 Vvi-Chr12 14484623 14485753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1042 10 311 Peroxidase AT5G64120 67.550 1.18e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1042 K00430 - vvi:100257139 614.764