Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g1022 ATGGTTTCCAAATTAATGCAAGTGATGGCCTTGGTTTTGGTTCTCATTTTTGGTTTTTTCATTGGGATTTCAAAAGCTCAACTGAGTGTGGGATTTTACACTGAAACATGCCCAGATGCTGAGTCTATTGTCGGTGCAACTGTTCGAGATGCAGCTCTGTCCAACCCCAATATTCTAGCAGTCTTGCTTAGGCTCCACTTTCATGACTGCTATGTTCAGGGCTGTGATGGCTCAATTCTCATTGACAATGATCCTGATGCTGAGAAGCATGCATTTGGCCACCAAGGTGTTGGAGGCTATGAAGTGATAGAAATTGCCAAGGAAAAGCTGGAATCCCAATGTCCGGGTGTGGTTTCTTGTGCAGATATTGTGGCATTAGCTGCTCGAGATGCTGTGGCCTTGGCTAATGGACCGGCATACCAGGTTCCCACAGGCCGAAGAGATGGCCGTGTCTCCAACATTTCACTGGCAGCTGATATGCCTGATGTGAGTGACTCAATTCAACAGCTGAAATCTAAGTTTTTAGACAGGGGTCTCTCAGAAAAAGACCTTGTGCTCCTCAGTGCTGCACACACCATTGGAACCACAGCATGCTTCTTCATGACAGACCGGCTGTACAACTTTTTTCCGGGTGGGGGATCCGATCCATCTATCAGCCCTGAATTCCTCCCAGAGCTAAAAGCAAAGTGCCCTCAGGATGGTGATGTTAATGTTCGGTTACCAATGGACCAGGGAAGTGGGGAGACATTTGACAAAAAGATTCTGGAAAACATTAGGGGTGGATTTGCTGTGCTGCAGTCAGATGCTAGTCTTATGGAGGATGAAGCAACTAAGAGCGTAATAGACTCCTACTTCGGCCCCCTAAACTCACAATTTGGACCATCTTTTGAGGAAGATTTTGTTAACTCAATGGTGAAAATGGGCCAGATCGGTGTGGAGACAGGTTCTGATGGGGAGATCAGGCGAGTTTGCGGAGCCTTTAATTGA 987 0.4671 MVSKLMQVMALVLVLIFGFFIGISKAQLSVGFYTETCPDAESIVGATVRDAALSNPNILAVLLRLHFHDCYVQGCDGSILIDNDPDAEKHAFGHQGVGGYEVIEIAKEKLESQCPGVVSCADIVALAARDAVALANGPAYQVPTGRRDGRVSNISLAADMPDVSDSIQQLKSKFLDRGLSEKDLVLLSAAHTIGTTACFFMTDRLYNFFPGGGSDPSISPEFLPELKAKCPQDGDVNVRLPMDQGSGETFDKKILENIRGGFAVLQSDASLMEDEATKSVIDSYFGPLNSQFGPSFEEDFVNSMVKMGQIGVETGSDGEIRRVCGAFN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g1022 328 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 FunFam Peroxidase 161 307 - -
Vvi12g1022 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vvi12g1022 328 Gene3D - 31 328 - -
Vvi12g1022 328 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 PANTHER PEROXIDASE 25-RELATED 14 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 Gene3D Peroxidase, domain 2 161 307 - -
Vvi12g1022 328 FunFam Peroxidase 31 173 - -
Vvi12g1022 328 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g1022 328 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Vvi12g1022 328 Pfam Peroxidase 46 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g1022 Vvi-Chr12 14103746 14106108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g1022 6 328 Peroxidase AT1G77100 55.828 6.38e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g1022 K00430 - vvi:100260726 644.425