Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0941 ATGGATTTACTGCTATCAGAGGCATCACCACAGAAGATTTGCTTGCAAATTGGGTTGTGCACCTTTGATGAGACTCGTGGTGTTGACATGGGCATTAAGAGTGTTGTGGATGAGGAGAAATTAGATGATGCTAGTTATGGATTGAAGCGGTTGCATGATCTTGGTTACTTTTCCACTTTTGCATGGCCATGCATGGCCCCACCAAACCTTTGCAAAACCTACTACGCTTCATACCCACAATGCCCATCACCATTCATGCGCACCACTTCCTTATCTTTCATACCCTCTAAACCCATTTCTCTCATTACTTTCCACCATTCATCCCACCACTACAACCTACATCTTTCATACCCACAGAGTCATCTCCACTCATCTACAGTTCGAGAGTATGCTTTTGAAGGCCGAAATTTGGTGAAATCCATGGACCAAAGTGGGAGGCAGAGTGAAGGAAGAAGAAATGGAGACTCAAGTACTCAAACAGTAGAGAATACAACACCGTGGATATTAATTGTAGTAGCTGGCAACATTGACCGGTCCTTCCCTATACCCATCATACTAGGCAACAATCGCACGATCATGAGTCAAGCAATGTCAATTGGAAACCATACTGGCTTGGCCAGCTTAGCGTACCTAGATGACCCATATGTTGAAAGTGTTAGCAATTGTCTATCTATATCATTGAATGACACTTCAATGGCTGGAAAGGTGGCACTTTGCTTCACTTCAAGTACATCTGAGACAACATTTGTTGCATCTTTTGTGAGAGAAGCTCGTGGCCTAGGGGTGATTATTGTTGAGAATTCTGGAAATACCCAGGCATCATGCATTAGCAACTTCCCATGTATTAAAGTAAGCTACGAAATTGGAAGCCAGATACACTACTACATTAGTTCGACCAGGCATCCCCATGTAAGGTTGAGCCCTTTCTAA 930 0.4333 MDLLLSEASPQKICLQIGLCTFDETRGVDMGIKSVVDEEKLDDASYGLKRLHDLGYFSTFAWPCMAPPNLCKTYYASYPQCPSPFMRTTSLSFIPSKPISLITFHHSSHHYNLHLSYPQSHLHSSTVREYAFEGRNLVKSMDQSGRQSEGRRNGDSSTQTVENTTPWILIVVAGNIDRSFPIPIILGNNRTIMSQAMSIGNHTGLASLAYLDDPYVESVSNCLSISLNDTSMAGKVALCFTSSTSETTFVASFVREARGLGVIIVENSGNTQASCISNFPCIKVSYEIGSQIHYYISSTRHPHVRLSPF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0941 309 MobiDBLite consensus disorder prediction 141 160 - -
Vvi12g0941 309 Gene3D - 177 309 - -
Vvi12g0941 309 CDD PA_subtilisin_like 184 302 - -
Vvi12g0941 309 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 153 305 IPR045051 -
Vvi12g0941 309 FunFam subtilisin-like protease SBT1.5 177 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0941 Vvi-Chr12 12489938 12491248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0941 153 308 Subtilisin-like Serine Gene Family AT4G10540 47.531 2.42e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0941 - - vvi:100264034 249.98