Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0889 ATGAGGCTCTCAGGTCCAGCCCTTTGCCTCCTGTCATTTCTTCTTATCTCTCTATTGCTTAGTCCCACCTTTGCTATTGAAAGGTCATACATAGTGTATTTGGGAGCACACTCACATGGCCCAGAACCCTCTTCTGATGATCTGGATCAAGTTACTGAGTCTCATTATGAGTTTCTTGGATCATTCCTGGGAAGTCGTGATAATGCCAAAGAAGCCATTATTTACTCATACACAAGACACATCAATGGCTTTGCTGCAACTCTCCAGGACCATGAAGCTGCCCAGATAGCCAACCATCCCAAAGTAGTCTCAGTTTTCTTGAACAAGGGAAGGAAACTACACACAACAAGATCATGGCACTTTCTGGGTCTGGAGAATGATGGCATAATTCCTTCCAATTCTATCTGGAAGAAGGCGAGATTCGGCCAAGATACCATCATAGGAAACCTCGACACCGGTGTCTGGCCTGAATCAGCGAGTTTTAGTGATGAAGGAATGGGACCAATTCCATCAAGATGGAGAGGAATCTGCCAAAATGACAAAGATGCTGGATTTCACTGCAATAGGAAGCTGATTGGGGCAAGATACTTCCACCAAGGATATGCTGCCGCCGTAGGCTCACTCAACTCTTCCTTCCATACCCCACGCGACACTGAGGGTCATGGGTCTCACACCTTATCAACAGCAGGTGGTAACTTTGTAGAGGGGGCTAGTGTTTTTGGCTTTGGCAATGGAACAGCGAAAGGTGGGTCGCCTAAAGCACGGGTGGCAGCTTACAAGGTGTGTTGGCCACCGGTGGGTGGCAATGAGTGCTTTGATGCAGATATACTGGCAGCGTTTGATATAGCCATCCATGATGGAGTTGATGTGCTATCTGCTTCACTAGGAGGATTACCCACACCCTTTTTCAACGATAGTCTTTCTATAGGTTCCTTCCATGCAGTTAAGCATGGTATTGTGGTGGTTTGCTCAGCTGGCAATTCTGGACCCGCTGATGGTACTGTTTCAAACATTTCACCATGGCAGTTCACCGTTGGAGCCAGCACCATGGATCGCCAGTTCCCTAGTTATCTTGTCCTTGGAAACAAGAAACGCTTAGAGGGAGGAAGTCTTTCACCTAAAGCCTTGCCACCCAACAAGTTCTTTCCACTTATCAGTGCTGCAGATGCCAAAGCAGCTAATGCATCAGCTGATGACGCTTTGCTTTGTAAGGCTGGGACACTTGATCATAGCAAGGTGAAGGGAAAGATCTTGGTGTGCCTTCGAGGGGAGAATGCAAGGGTGGACAAGGGCCAGCAAGCTGCTCTGGCTGGTGCTGTGGGGATGGTTCTTGCCAACAATGAGCTTACTGGGAATGAAGTTATAGCTGATCCCCATGTCCTCCCTGCTTCGCATATCAACTTCACTGATGGGGTTGCTGTCTTCACCTACCTCAATTCGACTAAGTCTCCCATTGCTTATATTACACCTTCAACAACTGAGTTGGGCACTAAGCCAGCACCCTTCATGGCAGCTTTTTCATCAAAGGGACCTAACACCATTACACCAGAGATCCTTAAGCCAGATATAACCGCACCTGGAGTAAGTGTAATAGCTGCATACACTGAAGCACAAGGGCCAACTAATCAAGATTTTGATAAACGGAGAGTTCTATTTAACTCGGTATCAGGCACTTCAATGTCGTGCCCTCATGTTTCTGGCATTGTTGGCCTTCTTAAAACCCTCCACCCGGATTGGAGTCCTGCTGCTATTAGATCAGCAATGATGACCACCGCAAGAACAATGGACAATTCTATGGAAGCAATACTCAATGCATCCTATTTCAAGGCAACACCATTCAGCTATGGAGCAGGACATGTTCGGCCAAACCGTGCTATGAATCCAGGGTTGGTTTATGACTTAAATGTTAATGACTACCTCAACTTTCTATGTGCCTTGGGGTATAACCAAACCCTGATCAAAATGTTCTCAGAGAGGCCCTATACATGCCCCAAGCCAATCAGTCTCACCAACTTCAATTACCCTTCAATCACAGTCCCTAAGCTCCATGGCTCTATCACTGTGACTCGAACTCTTAAGAATGTTGGTCCTCCCGGAACCTACAAAGCACGCATCCGGAAACCCACTGGAATCTCAGTTTCAGTCAAGCCAGACAGCTTAAAATTCAATAAGATCGGGGAAGAGAAGACCTTCAGTCTTACTCTCCAGGCTGAAAGAGCCGGTGCAGCAAGGGACTATGTATTTGGAGAGTTGATATGGTCAGATGCTAAGCATTTTGTGAGAAGTCCTATTGTGGTGAAGGCAGCCTAG 2310 0.4693 MRLSGPALCLLSFLLISLLLSPTFAIERSYIVYLGAHSHGPEPSSDDLDQVTESHYEFLGSFLGSRDNAKEAIIYSYTRHINGFAATLQDHEAAQIANHPKVVSVFLNKGRKLHTTRSWHFLGLENDGIIPSNSIWKKARFGQDTIIGNLDTGVWPESASFSDEGMGPIPSRWRGICQNDKDAGFHCNRKLIGARYFHQGYAAAVGSLNSSFHTPRDTEGHGSHTLSTAGGNFVEGASVFGFGNGTAKGGSPKARVAAYKVCWPPVGGNECFDADILAAFDIAIHDGVDVLSASLGGLPTPFFNDSLSIGSFHAVKHGIVVVCSAGNSGPADGTVSNISPWQFTVGASTMDRQFPSYLVLGNKKRLEGGSLSPKALPPNKFFPLISAADAKAANASADDALLCKAGTLDHSKVKGKILVCLRGENARVDKGQQAALAGAVGMVLANNELTGNEVIADPHVLPASHINFTDGVAVFTYLNSTKSPIAYITPSTTELGTKPAPFMAAFSSKGPNTITPEILKPDITAPGVSVIAAYTEAQGPTNQDFDKRRVLFNSVSGTSMSCPHVSGIVGLLKTLHPDWSPAAIRSAMMTTARTMDNSMEAILNASYFKATPFSYGAGHVRPNRAMNPGLVYDLNVNDYLNFLCALGYNQTLIKMFSERPYTCPKPISLTNFNYPSITVPKLHGSITVTRTLKNVGPPGTYKARIRKPTGISVSVKPDSLKFNKIGEEKTFSLTLQAERAGAARDYVFGELIWSDAKHFVRSPIVVKAA* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0889 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Vvi12g0889 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Vvi12g0889 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 766 IPR045051 -
Vvi12g0889 769 CDD PA_subtilisin_like 357 488 - -
Vvi12g0889 769 Pfam PA domain 396 472 IPR003137 -
Vvi12g0889 769 SUPERFAMILY PA domain 410 482 IPR046450 -
Vvi12g0889 769 Gene3D Peptidase S8/S53 domain 144 639 IPR036852 GO:0004252|GO:0006508
Vvi12g0889 769 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Vvi12g0889 769 Pfam Fibronectin type-III domain 671 766 IPR041469 -
Vvi12g0889 769 ProSiteProfiles Serine proteases, subtilase domain profile. 118 626 - -
Vvi12g0889 769 Pfam Subtilase family 142 600 IPR000209 GO:0006508|GO:0008236
Vvi12g0889 769 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Vvi12g0889 769 FunFam Subtilisin-like protease SBT1.5 144 363 - -
Vvi12g0889 769 CDD Peptidases_S8_3 112 592 IPR034197 -
Vvi12g0889 769 Gene3D - 351 495 - -
Vvi12g0889 769 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vvi12g0889 769 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Vvi12g0889 769 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Vvi12g0889 769 FunFam p69E protein-like 643 769 - -
Vvi12g0889 769 FunFam subtilisin-like protease SBT1.5 351 495 - -
Vvi12g0889 769 Gene3D - 643 769 - -
Vvi12g0889 769 SUPERFAMILY Subtilisin-like 113 630 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0889 Vvi-Chr12 10151347 10162421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0889 29 767 Subtilisin-like Serine Gene Family AT2G04160 68.016 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0889 - - vvi:100252770 1516.13