Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0807 ATGAACACACAGGCGGCCCAGCTCCGACCATCAATAGATCGTCGCGATGCTGACGACCACGGTATTTACACAGACGTCGATGGTGATGGCGATGGTACTCACATACACTTTGACGGCGATGGCGATGGTACTCATGTAGACTTCGATCGGAACGGCGATGGTGCTCACATAGACGGCGATGGTACTCACGTAGACTTCGACGGGGACGGTGATGGTACTCTTATAGACGTCGACGGCCACGGTACTCACAAATACGCCAACGGCCTCGGTATTCACTCAAACGTCGACGGGGACGGGGACGGCGATGCTACTCACACAGACGTCGATGACAACGGTACTCACAAAGACGTCAACGGCGTCTGTGGTACTCCCGTAGACTTCGACGGCGATGTTACTCACATAGATGTCGACAACCACGGTACGCACACAGACGTCGACGGCCATGACACTCACAAGGACCATAAGCAGCTAGGTCGACTTCCCAGAGGCTCCACTGAAGACGGTAGTTCACTACCATCTCGGGTGAATGCAGCACTACCAAGCAGGCCATGGATAGCTGCAGCGGCCATCTTGCAGTCCGCACTTGAAGGCACGCTGTCTCAGAAGACCGCGTTTAATGGCGAATTAGTTGAACAAAACCAGGTTGACGACGGGCTGGCTCAGCAGACCAAACTTGACGCCAGATTAGCTGGGCAGATCACGGTTGCCTGCAGAGTGCTTGATCAGTCCACTGTTGTTAGAGGACTGGCTGAACAAACCACGGTTGATGCCAAGGCTTGTTCCCCCAGGAATTATAAGCGGCAGCCTCATGAAGTAGAGGTTGGTTCTATGGTAGGAGCGTCCAATGATGGAGATTCTTCTCCGAGAATTACTTTGCCGTTGCAGCTTGACGAGGTTGCTATTCATTTGTCTATTCCGTCTCAATGTGCGGTGGGCAATGGATCCTATAACAACGATGATGGTGTGAATTCAGTTATTGGACAGCTCAAGTCGAAGGCAGTTCACAGTGTAATTTGTTCATTTAGTGCATCTAGTGGCCAAGTTGTGGTCGACTTGTGCAACATGAACACCTCATTCAAAAGTGAGGAGGGCGCCGGCATAAGCAAAAATTACGAGGAAGATGGACAGCACCTCCTACTCAACGCAATGGTTAAAATTGAGGATGAGGACTTGGATCCTCCGCCAGCTATTTTAGTCCAGGAGGAAGAAGTGCAGCAACTACAGACCATTGCTATCTCGGAGATTCTTAAGGAAGAGAAAGACTGGAACGCTCAACTAGGGAGAAACAACTTGCCTGAGGATGAAGGGCAGCAACTATGGAAAGCTGTTGCTAAGATTGTAGAAAAGAAATTCTTGAATGCGCTGAGAAGATTGGGTGGAGCAGAACAAGTATTCTTGAATTTGGGTCCCCTCCTGGGGGCTAGAAAAGTTGCTGGAGATGGCCCAGAATTTTTGGAATGTACCAAAACCCCAGTTTATGAAATAGGTAGCTTCTTTCTCCAAGCTTGCAAAAGGCGCACCAATGTCATACTCCTGCTCCTAGGTGCGTTGGTTCTTGCACTGGGGATGTGGGAAAAAGGCACCCAGAAAGGGTGGCACGATGGCTTTGGGATACTTATGGCCCTATTCTTAATTCTCAGTTTTACTTCAGTTTCTAGATTCCGACGTGCACGTCAGATGAAGAAGAGATTGATTGAGGAAAACGGATTACAGGTGGAGGTTATTAGAAGTGGACAGTCCCACTTGGTTCCCATCTGTGAGATTGGGGAGGACATGATAGTGCGCTTGAGGAAGGGCAGCCTGGTTCCTGCTGATGGTCTGCTGGTTGGTGGTAATAGCTTAGTGTTGGATGGGATATTAGACAAAAATATCAGCTGTGATCAGAATCCATTTCTCTATGCTGGTTCCAAGGTAATTCAGGGGGATGGCCTTATGTTGGTAACATCTGCTGGTAACGCTACAGAATTGGGCACGGCAATGAGTTTGGTGACTGACCATGCAGATGACAAGCTACTGCTTGAACCTCGGCTCAGAAAGCATAATCTTCATGCAAATATTAAGAATCTGACAAAAGAGGCATTGCTCGAAGGAAGGATCAACAAACCCATTGCTTTGGTAGACGATTCTGCACTCGTTATTTCTATACTGTTAGTTGGTCTTATTTTACTGTTACGCTCTTTAATTAGGAGAGACATTAATTACGATGTATCACAGCAAGTAAAGGGAGAAGTTGGGATAAAGGGGGTGATGGATACTTTGAAGGTACTCTTGAACTCGGAAGGGAAGGTCCGGATTTTGGCAGCTTTCCTCACTGCTGTTGTGATGGGATTACAGCATGGGATTCCTTTTGTGATTTCAGGTTGCCTCTCTTACTGGAATGGGAGAAGTAGATCCAGTAACATAACCCTAAACCCTAAAAGTTTATCAGCTTGTGGAACATTGGGCATTGTCACAGTCTTATGCATAGACATATCAGGTGGGATATTAACGAGTGACAGGATGGAGGTTAACAGGTTCTGGATAGGTGAGGAAGATATAGCTGATGATCATGATGATGGTCATTCTGAAGTGTCCCCAGTGGTGCTTGAGGCTCTGAGCCGAGGAGTTGGAGCGATGGGTCTTGTGCCTGGAATTCCTCTTACTTCAGCAGATGATGCTCTCATTTGTTGGGCAAAGTCCAAACGGGGCTTCAAAATGGAGCTTCTGGAGCAAAGATCTACAGCTGTCTGTGATGGAAAATTAAGTTCCAACAAGGAAGGTAATGGGGTTTTGTTAAGAAACAGTGATGACGATGAAAACATTTTGCACTTGCACTGGAAAGGAGATGCCGAGACCATATTGGACCTGTGCTCACGTTACTATGAATGTGGAGGTGAGATTCATGCCATTGAGAAACAGAAAAGCAAATTTGAGAAAGTGATTAAAGAAATGGAGGGTAGCGGTCTCCAACCCATTGCATTTGCTTACAAGCAGACAGAAGTCATAGAACTTGAGGAGAATGGGTTAATCTTATTAGCACTAGTGGGTGTTAAACAGTACTACTGTCTGGAGGAGATCAAATCAGTGGTGAGGACTTTCAAAAACGCCGGTATAATCATCAAACTGGTATCCCAGGATGATCTGCCAACCTCGAGACCCATAGCTAGGGAGTTGGGTTTATTTAGTCCTGGTTCAGATGATGATGGTCAGACACTCAAAGGCCATGAGTTTAGAGAACTCAGCGATGATGTCAGGGCGGAAACAGCTGATCAGATCACCCTCCTGTGGAGTTCCCTCCCCACGGAGAAGCTTCTCATGGTAAAATCCTTGAAACAAAGAGGCCATGTTGTAGCATTCCTTGGAGGCTTAACCGCAAGGGATGCCCCAGTTCTGAAAGAAGCTGACATAGGGATCACGACAGGAAATCGGAGCACCCAACTGGCAGTAGAGATCTCTGACATCGATATAGGCAAAAGTCTCACTTCATTAATCCCAATTTTAGCCTCTGGCAAACTAGCTTACCGCAGCATCCAGAAGTTCGTCCACATTCATGTCACCAGCAATCTTACCATCTTACTCACCACTGCAGTCGAATCAATATGCCTGGGAGAAACCTCAATCACCATTTTCCACTTGCTGTATTTGAATCTGATTTTGGGGATTGTGGGCGGCTTCATGCTTGTAACGAAGCCCCGAAACCAGCAACTAGGTAGCATTGAACCAGGTAAGAGAAATGCATGGATTATCACAAAGGCAATGTGGGGAAACACATTGATCCAAGTACTGTACCAGGTTGCTGTTTTGCTCATGTTTCAGTTCAAGGGAGAGGCTGTACCAGGCATGAAACACATCAATCAGAAGGTCAGAAAAGCCGTGATTTTCTTTTCTTTCATCCTCTACCAGGTGCCCAGTTATTTCAGCCCCGTACCAGTACCATTAATCCCAGAAACGGCAAAGTTTTATGACCTACACAACTATCGCTTTGTGGGTGTGGTGGGGGCTTTTACAGTCATGCAGGTGGTGGGAGCCACTGAATTTTGGGTGAGGTTGAACTGGGTGCACTTGGCTTTCTGTTCCCTCATCAGTCTCATCTCCTGGGTCATCCATTTGGCCACAGTATTCCTTTCACTCCTCATCAAAAGACGGGCTTCATGA 4134 0.4712 MNTQAAQLRPSIDRRDADDHGIYTDVDGDGDGTHIHFDGDGDGTHVDFDRNGDGAHIDGDGTHVDFDGDGDGTLIDVDGHGTHKYANGLGIHSNVDGDGDGDATHTDVDDNGTHKDVNGVCGTPVDFDGDVTHIDVDNHGTHTDVDGHDTHKDHKQLGRLPRGSTEDGSSLPSRVNAALPSRPWIAAAAILQSALEGTLSQKTAFNGELVEQNQVDDGLAQQTKLDARLAGQITVACRVLDQSTVVRGLAEQTTVDAKACSPRNYKRQPHEVEVGSMVGASNDGDSSPRITLPLQLDEVAIHLSIPSQCAVGNGSYNNDDGVNSVIGQLKSKAVHSVICSFSASSGQVVVDLCNMNTSFKSEEGAGISKNYEEDGQHLLLNAMVKIEDEDLDPPPAILVQEEEVQQLQTIAISEILKEEKDWNAQLGRNNLPEDEGQQLWKAVAKIVEKKFLNALRRLGGAEQVFLNLGPLLGARKVAGDGPEFLECTKTPVYEIGSFFLQACKRRTNVILLLLGALVLALGMWEKGTQKGWHDGFGILMALFLILSFTSVSRFRRARQMKKRLIEENGLQVEVIRSGQSHLVPICEIGEDMIVRLRKGSLVPADGLLVGGNSLVLDGILDKNISCDQNPFLYAGSKVIQGDGLMLVTSAGNATELGTAMSLVTDHADDKLLLEPRLRKHNLHANIKNLTKEALLEGRINKPIALVDDSALVISILLVGLILLLRSLIRRDINYDVSQQVKGEVGIKGVMDTLKVLLNSEGKVRILAAFLTAVVMGLQHGIPFVISGCLSYWNGRSRSSNITLNPKSLSACGTLGIVTVLCIDISGGILTSDRMEVNRFWIGEEDIADDHDDGHSEVSPVVLEALSRGVGAMGLVPGIPLTSADDALICWAKSKRGFKMELLEQRSTAVCDGKLSSNKEGNGVLLRNSDDDENILHLHWKGDAETILDLCSRYYECGGEIHAIEKQKSKFEKVIKEMEGSGLQPIAFAYKQTEVIELEENGLILLALVGVKQYYCLEEIKSVVRTFKNAGIIIKLVSQDDLPTSRPIARELGLFSPGSDDDGQTLKGHEFRELSDDVRAETADQITLLWSSLPTEKLLMVKSLKQRGHVVAFLGGLTARDAPVLKEADIGITTGNRSTQLAVEISDIDIGKSLTSLIPILASGKLAYRSIQKFVHIHVTSNLTILLTTAVESICLGETSITIFHLLYLNLILGIVGGFMLVTKPRNQQLGSIEPGKRNAWIITKAMWGNTLIQVLYQVAVLLMFQFKGEAVPGMKHINQKVRKAVIFFSFILYQVPSYFSPVPVPLIPETAKFYDLHNYRFVGVVGAFTVMQVVGATEFWVRLNWVHLAFCSLISLISWVIHLATVFLSLLIKRRAS* 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0807 1377 MobiDBLite consensus disorder prediction 139 161 - -
Vvi12g0807 1377 Gene3D - 544 665 - -
Vvi12g0807 1377 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 829 1010 IPR023299 GO:0000166
Vvi12g0807 1377 SUPERFAMILY Calcium ATPase, transmembrane domain M 495 1364 IPR023298 -
Vvi12g0807 1377 MobiDBLite consensus disorder prediction 139 174 - -
Vvi12g0807 1377 Gene3D - 1008 1154 IPR023214 -
Vvi12g0807 1377 SUPERFAMILY HAD-like 1014 1148 IPR036412 -
Vvi12g0807 1377 Gene3D - 1155 1294 - -
Vvi12g0807 1377 SUPERFAMILY Calcium ATPase, transduction domain A 571 663 IPR008250 -
Vvi12g0807 1377 PANTHER CATION TRANSPORTING ATPASE 424 1364 - -
Vvi12g0807 1377 Pfam Cation transporting ATPase, C-terminus 1200 1371 IPR006068 -
Vvi12g0807 1377 Gene3D - 876 1007 IPR023299 GO:0000166
Vvi12g0807 1377 Pfam E1-E2 ATPase 571 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0807 Vvi-Chr12 9246966 9251099 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0807 489 1368 Primary Pumps ATPases AT3G63380 33.260 4.70e-123 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0807 K01537 - vvi:100251010 855.514