Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0788 ATGAGAGCCTGTTTGGAGGGGAAAAAAGTGATACTGGTTCCGTACATGAAGGAGCATGTCCCCAAGTACCACCAATGGATGCAAGACCCGGCTCTCCTCCAAGCCACCGGGTCGGAGCCCCTGACCCTGGACCAAGAGTACGAGATGCAGCTCTCCTGGACCCAAGACCCCAACAAGCGAACTTTCATTGTTTTGGACAAGGAGATGGTTGATGGAGACTTCATCCAAGGGCATCCCCACGTGGAGGCCATGGTTGGTGATGTCAATATATACATGAATGACTTGGATGATTCCCAAATGGCAGAGATTGAAATCATGATAGCTGAAACCAAAAGCCGTGGCAAAGGACTTGGCAAGGAAGCAATCCTGATGATGATGGCCTTTGCAATTGAAACCCTTGGAATCCACGTGTTCCGTGCTAAAATTGGAGAATCAAATCAAGCTTCTCTTAATCTGTTTAGAAAATTGGGCTTTGAGGAGGCTTCCTACAGTGAAATCTTCAAAGAGGTAACGCTGGAGTTGCCAATTACAAAGCCTAAGCATGAGGAGCTGCTGGGTTTAATTGGTAATATGGTTACACATATGTAG 588 0.4694 MRACLEGKKVILVPYMKEHVPKYHQWMQDPALLQATGSEPLTLDQEYEMQLSWTQDPNKRTFIVLDKEMVDGDFIQGHPHVEAMVGDVNIYMNDLDDSQMAEIEIMIAETKSRGKGLGKEAILMMMAFAIETLGIHVFRAKIGESNQASLNLFRKLGFEEASYSEIFKEVTLELPITKPKHEELLGLIGNMVTHM* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0788 195 PANTHER N-ACETYLTRANSFERASE 9 3 186 IPR039135 GO:0008080
Vvi12g0788 195 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 160 IPR016181 -
Vvi12g0788 195 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 1 165 - -
Vvi12g0788 195 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 179 IPR000182 GO:0016747
Vvi12g0788 195 Gene3D - 1 168 - -
Vvi12g0788 195 Pfam Acetyltransferase (GNAT) domain 10 159 IPR000182 GO:0016747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi12g0788 Acetyltransf_3 6.7e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0788 K25762 - vvi:100240921 393.275