Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0723 ATGCCGAGTTTGCAAGATATAGAGTCAATGATGGTTGGCATCGATGATATGGAGGAATTTAAGCGGGTCTTCTTGATTTTCGCTTGTGCAACCTTATTGGCACCCACATCTCATTTGGAAGCCCAATTACCGCCAGTGTCCATAATATCAGACTCACTGGTGGCCCCACTTTTAGCTGTTCAAGTGACACTTTTTCCGAACTCTGGGATTTGTATTGGATTCACTTTTCGCCGTGTAACTGCAGATGGCAATGCATGTACAAGATTCATAAGATCATGGGCTAGTATTAATAAAGTAGGCAGAGAGACCACCATGGTGGAGAGTGGTACCCTCCCATTCTATGATCGGACCATGGTCAAGGACCCGAATGGGTTAGCATCAGTTTTTTGGAACCATGTGGGGAAAATAAAGTTTGAAGGGTCTCAACGTCAGCTCTCCACCAACAAGGTCATAGCCACATTTATTCTGGGCCAATCCCATGTCCAGCAGCTCAAAAAATGGGTTCTGTCTCAATGCCCAACATCATCACATGTGTCAACTTTCACAGTGACATGCGCTTATGTGTGGACCTGTATGGTAAAAGCTCGAGAAAGAAGTGGTGAGAAGGTGACTGAAGATGAATTAGAACACTTTGTTTTTGGGGCAGATTGCAGAGCTCTCTTGCAGCCCCCATTGCCTGCAACCTACTTTGGTAACTGCTTGGTATCATGCTTTGCAACTACAAAAACCAAGGAACTGATGGGGGACAACGGCTTCATAATCGCAGCCAAAACGATAGGAGAAGCAATTCAAGAGAGGCTTCGGAAGAAGGAAGGAGTATTGAAAGATGCAGAGAAATGGATATCGGAGTTTGAAACTCGAAAAGAGGATAGAATAGTCGGAGTCGCAGGATCACCAAGGTTTGCAGTCTATGATATAGATTTCGGGTTGGGGAAGCCTAAGAAAAGTGAGGTGGTGTCGATAGATATGACAGGTTCCATCTCACTTAATGAGTGCAAAAATGACAAAGAAAGTTTTGAGATTGGCTTGTCTCTTCCCAAGATTAAGATGGATGCCTTTGAGGATATCTTTGCTAATGGGTTCCAAGTTTAG 1092 0.4414 MPSLQDIESMMVGIDDMEEFKRVFLIFACATLLAPTSHLEAQLPPVSIISDSLVAPLLAVQVTLFPNSGICIGFTFRRVTADGNACTRFIRSWASINKVGRETTMVESGTLPFYDRTMVKDPNGLASVFWNHVGKIKFEGSQRQLSTNKVIATFILGQSHVQQLKKWVLSQCPTSSHVSTFTVTCAYVWTCMVKARERSGEKVTEDELEHFVFGADCRALLQPPLPATYFGNCLVSCFATTKTKELMGDNGFIIAAKTIGEAIQERLRKKEGVLKDAEKWISEFETRKEDRIVGVAGSPRFAVYDIDFGLGKPKKSEVVSIDMTGSISLNECKNDKESFEIGLSLPKIKMDAFEDIFANGFQV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0723 363 PANTHER - 39 361 - -
Vvi12g0723 363 Gene3D - 146 363 IPR023213 -
Vvi12g0723 363 Gene3D - 21 145 IPR023213 -
Vvi12g0723 363 Pfam Transferase family 35 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0723 Vvi-Chr12 8255866 8262298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0723 33 354 Monolignol Biosynthesis Gene Families AT5G48930 25.439 9.92e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0723 - K12936 vvi:100256273 652.129