Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0722 ATGGAGTTATCAACACGGCCTTCTACAAACAACGTCCTAGACACATTTGTACTCAACCAAGAGGATCTCCAACGACTCAAAAGATGGGTTGCAGCCAAATGCCCCACGTTATCACATGTATCAAGTTTTACAGTAGCATGCGCTTATGTATGGGATTGCATGGGTAAAGCTCGAGCAAAGAGTGGTGAAGATGTGGGTGAGAATGAGCCGGAGCATTTGGCTTTTGTGGGGGGCTGTCGAGCTTATTTTGATCCACCCATACCTGCAAACTATTTCGGTAATTGCTTAGCTCCATGTTCAGCGACAGTGAAGAGTTTGGAACTGATTACAGAAGATGGCTTCATAGTTGCAACCAATACTATAGGAAAGGCAATTCAAGAAAGACTTCGAAACAAAGAAGGAATTCTGAAAGGGTTGGAGAAATGGATGTCGAATTATAAATCTTTAAATCCAAAGAGAATATTTGGAGTCGCTGGATTGCCAAAGTTTTCGTGTTATGATATAGATTTTGGGTTAGGCAGACCTTGCAAGGGAGAAATCATATTGATAGACGTGACAAAATCCATATCACTCAATGAAGGCAAAAACAATAAAGAAGATGTTGAGATTGACTTATCATTTCCCAAGATTAAGATGGATGTTTTTACCTCTATCTTTGTTAATGGTCTCAAGATTTACGATTAG 684 0.3991 MELSTRPSTNNVLDTFVLNQEDLQRLKRWVAAKCPTLSHVSSFTVACAYVWDCMGKARAKSGEDVGENEPEHLAFVGGCRAYFDPPIPANYFGNCLAPCSATVKSLELITEDGFIVATNTIGKAIQERLRNKEGILKGLEKWMSNYKSLNPKRIFGVAGLPKFSCYDIDFGLGRPCKGEIILIDVTKSISLNEGKNNKEDVEIDLSFPKIKMDVFTSIFVNGLKIYD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0722 227 Pfam Transferase family 7 217 - -
Vvi12g0722 227 Gene3D - 8 226 IPR023213 -
Vvi12g0722 227 PANTHER - 7 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0722 Vvi-Chr12 8242830 8243513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0722 10 176 Monolignol Biosynthesis Gene Families AT5G48930 23.864 7.04e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0722 - K12932 vvi:100245977 464.536