Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0721 ATGTCACCAGCATCCACAAGTACCTTTGGCCCATTAATTGTCCCTCTCCTAGCTATTCAAGTGACACTTTTTCCGAACTCTGGTATATGTATTGGGTTCACATTTCATCACATAGCAGGCAATGCGAACACATTCTTTCGGCTTGCAAGATCATGGGCTTCCATTAACAAACTGGGTGGAGATGCAACATTGGTAGAGAGTCTAATCCTTCCGTTCTATGACAGGACCGTGGTCAAGGATCCAATTGGGCTCCGCTCAACCTTCTGGAACTATTTTGGAAAAGTGAAGTTTGAAGAGTGTCAATCTCAGCTATCTACCAATAGTGTCCGAGCCACATTCTTACTCCGCCGAGCTGAAGTTCAACGACTCAAGAAATGGGTTATTCCTCAAATCCCAAAGCAATCACATGTCTCTGCTTTTACAGTAGTATGTGCTTATGTATGGTCTTGCATGATCAAAGCTCGATCAAGAAGTGGTGAGGATGTTGGTGAAAATGAATTAGAGCATTTTGCTTTCACGGCTGATTGTCGGACCCTTCTGGACCCGCCTATACCTGCAGCTTATTTTGGTAACTGCTTAATGGGTGGTTTAGCGACCACAAAGAGTACGTGA 612 0.4428 MSPASTSTFGPLIVPLLAIQVTLFPNSGICIGFTFHHIAGNANTFFRLARSWASINKLGGDATLVESLILPFYDRTVVKDPIGLRSTFWNYFGKVKFEECQSQLSTNSVRATFLLRRAEVQRLKKWVIPQIPKQSHVSAFTVVCAYVWSCMIKARSRSGEDVGENELEHFAFTADCRTLLDPPIPAAYFGNCLMGGLATTKST* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0721 203 Gene3D - 106 203 IPR023213 -
Vvi12g0721 203 Gene3D - 2 105 IPR023213 -
Vvi12g0721 203 Pfam Transferase family 14 197 - -
Vvi12g0721 203 PANTHER - 14 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0721 Vvi-Chr12 8235233 8235844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0721 15 193 Monolignol Biosynthesis Gene Families AT5G48930 25.000 5.68e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0721 - K12936 vvi:100263140 414.075