Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0717 ATGGCTTCATTTGAAACGGTAAATGTCTTAGAGCGCTGCCAGGTCGCTCCACCTCCGGTCATGGTTGATGAGAAGTCAAAGTCACTTCCTCTCACCTTTTTCGACATGCCATGGCTGCATTCCCATTTGATGGAAAGTCTTATCTTTTATGCATTCCCCCACCCCAAGACCCACTTCATAGAAGCCATAATTCCTAACTTCAAGCACTCTCTTTCACTCGCTCTCAGGCACTTTTACTTTCTTGCTGGAAATCTAATATTTCCTCCAAACTTCACCAAGCCTGAAATTCGCTACAAGGATGGTGATTCAGTTTCATTAATCTTTGCTGAGAGTACCAGAGATTTTAATTATTTGATCGGCAATCACCCACGTAATGTAGCTGAATTTCATCCTCTTGTACCACAATTATCACCTGTCTCCATGTCCTCTAGCATACTAGCCGCTCCCCTTCTGGCCATCCAAGTGACTCTTTTTCCTAACTTTGGAATTTCTTTGGGATTCACCTTTCCCCATTCTGTTGCAGATGGCAATACATTTTCTCAATTCGTACGGCTATGGGCTTCAATTAATAAACTAGGAGAAGAGACCGCCATGTTACAAGATCGTATTCTCCCCTTCTATGATAGAACTGTGGTGAAGGACCCTCTCGGAATAGAGTCCATTTTTTGGAACCAAGTGGGGAAGATAAAGTTCGAAGGATATCGACCTCGGCCTCCTACAAACAACGTCCTAGCCACATTTGTACTCAGCCAAGAGGATCTCCAGCGACTCAAAAGATGGGTTGCAGCCAAATGCCCTACGTTATCACATGTATCAAGTTTTACAGTAGCATGCGCTTATGTATGGGCTTGCATGGCTAAAGCTCGAGCAAAGAGTGGTGAAGATGTGGGTGAGAATGAGCCGGAGCATTTGGCTTTTGTGGGGGACTGTCGAGCCTATTTTGATCCACCCATACCTGCAAACTATTTCGGTAATTGCTTGGCTCCATGTTCAGCGACAGTGAAGAGTTTGGAACTGATTACAGAAGATGGCTTCATAGTTGCAGCCAATACTATAGGAAAGGCAATTCAAGAAAGACTTCGAAACAAAGAAGGAATTCTGAAAGGGTTGGAGAAATGGATGTCGAATTATAAATCTTTAAATCCAAAGAGAATATTTGGAGTCGCTGGATCGCCAAAGTTTTCGTGTTATGATATAGATTTTGGGTTAGGCAGACCTTGCAAGGGAGAAATCATATCGATAGACGTGACAAAATCCATATCACTCAATGAAGGCAGAAACAATAAAGAAGATGTCGAGATTGGCTTATCATTTCCCAAGATTAAGATGGATGTTTTTACCTCTATCTTTGTTAATGGTCTCAAGATTTACGATTAG 1377 0.4248 MASFETVNVLERCQVAPPPVMVDEKSKSLPLTFFDMPWLHSHLMESLIFYAFPHPKTHFIEAIIPNFKHSLSLALRHFYFLAGNLIFPPNFTKPEIRYKDGDSVSLIFAESTRDFNYLIGNHPRNVAEFHPLVPQLSPVSMSSSILAAPLLAIQVTLFPNFGISLGFTFPHSVADGNTFSQFVRLWASINKLGEETAMLQDRILPFYDRTVVKDPLGIESIFWNQVGKIKFEGYRPRPPTNNVLATFVLSQEDLQRLKRWVAAKCPTLSHVSSFTVACAYVWACMAKARAKSGEDVGENEPEHLAFVGDCRAYFDPPIPANYFGNCLAPCSATVKSLELITEDGFIVAANTIGKAIQERLRNKEGILKGLEKWMSNYKSLNPKRIFGVAGSPKFSCYDIDFGLGRPCKGEIISIDVTKSISLNEGRNNKEDVEIGLSFPKIKMDVFTSIFVNGLKIYD* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0717 458 Gene3D - 6 234 IPR023213 -
Vvi12g0717 458 PANTHER - 7 455 - -
Vvi12g0717 458 Gene3D - 238 457 IPR023213 -
Vvi12g0717 458 Pfam Transferase family 26 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0717 Vvi-Chr12 8202839 8204215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0717 48 406 Monolignol Biosynthesis Gene Families AT5G48930 24.352 6.61e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0717 - K12932 vvi:100254603 936.021