Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0699 ATGAGAAAGTGCTTTTGCAATGAAAACTTCAAATGGGATGGCTCCAGTTTAAATTGCACACAAGAACATGGCAATCTTGCCAAGACTCCAAAACCTGCTAATCAGAAGCCGTTATTATCATATCTGGCAATTGTGGTAGGCATACCAATTGCTGTTGCGCTAGTTGCACTTGTATGCATCATTGGTTATATGACTTATTTGCGCAAAAGAGCCATCACAAACAGGAAAGAAAACAAAACAACTCTTGCAGTTCACTTGTATGACAGTGAGAGGGGTGCGAAACACTTAATAGACTCAGAGCAATTCAGAGAAGAAGATAAGAAAGGCATTGATGTATCGTTTTTCCACTTAGAAGACATACTGGCTGCTACAAATAACTTTTTAGATGCAAATAAGCTTGGACAAGGGGGTTTTGGGCCAGTTTACAAGGGCAAGTTTCCAAAAGCGCAAGAGATTGTGGTAAAGAGACTCTCAAGAGCTTTAGGACAAGGCCTCAAGGAATTTAAGAATGAGGTTGTGTTAATTGCCAAACTTCAGCATCAGAACATGTTTAGACTTTTGGCTATTGTATTTAAGGAAATAAGAAGATCTTACTCTACGAATATATGTCCAACAAAAGCTTAG 624 0.3878 MRKCFCNENFKWDGSSLNCTQEHGNLAKTPKPANQKPLLSYLAIVVGIPIAVALVALVCIIGYMTYLRKRAITNRKENKTTLAVHLYDSERGAKHLIDSEQFREEDKKGIDVSFFHLEDILAATNNFLDANKLGQGGFGPVYKGKFPKAQEIVVKRLSRALGQGLKEFKNEVVLIAKLQHQNMFRLLAIVFKEIRRSYSTNICPTKA* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0699 207 SUPERFAMILY Protein kinase-like (PK-like) 111 194 IPR011009 -
Vvi12g0699 207 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 192 - -
Vvi12g0699 207 Pfam Protein tyrosine and serine/threonine kinase 131 193 IPR001245 GO:0004672|GO:0006468
Vvi12g0699 207 Gene3D Phosphorylase Kinase; domain 1 87 197 - -
Vvi12g0699 207 FunFam Uncharacterized protein 88 188 - -
Vvi12g0699 207 ProSiteProfiles Protein kinase domain profile. 127 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0699 Vvi-Chr12 8035048 8036036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0699 30 192 Receptor kinase-like Gene Family AT4G23190 31.902 1.22e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi12g0699 PK_Tyr_Ser-Thr 1.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0699 - - vri:117926477 375.555