Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi12g0689 | ATGTCGCATCTCGAGCTTCTGGAGTTGAACCAAACAGAATTCAAGTCACCAAGTTCTAACATATGCCCAATGCATATGCACTGTGGCTTCCAGGGCAAGTTTCTAGAGGGGCGAGAAATTGCGGTTAAGAGACTCTCTAGAGCTTCAGGACAAGGCTTACAGGAATTTAAGAATGAGGTTGTGTTAATTGCCAAACTTCAGCATCGGAATCTGGTTAGACTTTTGGGCTATTGTGTTGAAGGTGATGAGAAGATTTTACTCTATGAATATATGGCCAACAAAAGCTTAGATTCCTTCATATTTGTGGCTATGTCTCCGGAGTATGCATTGGATGGATATTTCTCAGAGAAGTCTGATGTCTTTTGCTTTGGTGTTATGGTACTTGAGATCATCAGTGGGAAGAGGAACACTGGATTTTATCAGTCTGACCGAACTCTGAGTCTTCTAGGTCATGCATGGAAGCTATGGAAAGAAGACAAGGTTTTGGAGTTGATGGACCAGACACTAAGTGAAACATGCAACACAAACGAATTTTCGAGGTGTGTAAATGTTGGGCTGTTGTGTGTGCAAGAAGACCCAAGTGACCGTCCCACCATGGCCATTGCAGTTCTTCTGCTCAGCAGTGATGCTGCAACAGTGCCCGTTCCTAAAGAACCAGCTTTTGTTGTAAAGAGGAACCTTTCTAGTACAGCTTCTTCTTCTAGCAAGGCTGAAGCCTCCTGGAAGAATGAGCTTGTAGCCTCCATAGGAGAAGGGCGATAG | 762 | 0.4409 | MSHLELLELNQTEFKSPSSNICPMHMHCGFQGKFLEGREIAVKRLSRASGQGLQEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKILLYEYMANKSLDSFIFVAMSPEYALDGYFSEKSDVFCFGVMVLEIISGKRNTGFYQSDRTLSLLGHAWKLWKEDKVLELMDQTLSETCNTNEFSRCVNVGLLCVQEDPSDRPTMAIAVLLLSSDAATVPVPKEPAFVVKRNLSSTASSSSKAEASWKNELVASIGEGR* | 254 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi12g0689 | 253 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 234 | IPR011009 | - | |
Vvi12g0689 | 253 | FunFam | Cysteine-rich receptor-like protein kinase 11 | 15 | 90 | - | - | |
Vvi12g0689 | 253 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 104 | 232 | - | - | |
Vvi12g0689 | 253 | Gene3D | Phosphorylase Kinase; domain 1 | 8 | 90 | - | - | |
Vvi12g0689 | 253 | Pfam | Protein tyrosine and serine/threonine kinase | 104 | 200 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi12g0689 | 253 | Pfam | Protein tyrosine and serine/threonine kinase | 37 | 100 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi12g0689 | 253 | Gene3D | Transferase(Phosphotransferase) domain 1 | 91 | 214 | - | - | |
Vvi12g0689 | 253 | FunFam | Uncharacterized protein | 87 | 214 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi12g0689 | Vvi-Chr12 | 7862518 | 7863796 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi12g0689 | 104 | 249 | Receptor kinase-like Gene Family | AT4G23140 | 46.053 | 1.23e-42 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi12g0689 | PK_Tyr_Ser-Thr | 2.2e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi12g0689 | - | - | vvi:104880903 | 293.508 |