Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0675 ATGCAAAGTCAACTCAGGAGCTCCCAAATTGAGGCCACAACCCAGCTGCAGGCTGGGAGTTTGCCTTTGTTACAGTTCCGGGCTCTGGTGAAACCATCTCCTCTACCAGACAGTTGGAAGCTGGTTGAGATTTTTTACAAGATTGGTGGCATTGGCACTATTCCTGTGGGTTGCGTTGAAACTGGTATCATTGAACTTCTCCAGTCAGCTGGAATTCACCATGAGTCTTTGGCAGAGGGTCTGCCTAGTGACAATGTTGGTTTCAACGTGAGGAATGTTGCTGTCAAGGATCTAAGACGTGGCTTTGTTGCATCTAACTCCAAAGATGATCCTGCAAAGGAAGCTGCCAACCTCACAGCCAGGTCATTATCGAGAATCACCATGGCCAAATTGGAAATGGTATGTCCCAGTCCTTGGCTGCTACACCTCTCACATTGCGGTAAAGTTTGTTGA 453 0.4768 MQSQLRSSQIEATTQLQAGSLPLLQFRALVKPSPLPDSWKLVEIFYKIGGIGTIPVGCVETGIIELLQSAGIHHESLAEGLPSDNVGFNVRNVAVKDLRRGFVASNSKDDPAKEAANLTARSLSRITMAKLEMVCPSPWLLHLSHCGKVC* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0675 150 Gene3D Translation factors 41 109 - -
Vvi12g0675 150 PANTHER ELONGATION FACTOR 1 ALPHA 43 121 - -
Vvi12g0675 150 SUPERFAMILY Translation proteins 42 111 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0675 Vvi-Chr12 7737088 7737737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0675 7 123 Eukaryotic Initiation Factors Gene Family AT5G60390 49.265 2.18e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0675 K03231 - vvi:100244821 119.012