Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0642 ATGCTGAGATTCTCACCATATAAATGCTGCATTTCCCTTACCATGAAGCCATCACCTGCATTGTCCAAGATGTCTTTCTCAAGATTTGCTTCATTTCTCTACCTTCTATCCTTTGTGCTCCTTCTCCAAACTGTCGTTGGGGTTGACCCTCTCTTCCATTTCTGTTCAAGCTCTGAGAAGTTCATAGATAATGGCCCATATGAGACCAACTTGAACAAGCTCATGGGCTATCTCTACTTGGCAGCTCCTCCCACAGGTTCTGGGAAAGGTTCAGTTGGTCAGAACCATGACCAAGTGAATGGGCTTGCTCTCTGTCGAGGTGATGTTTCAAACACAGACTGCAAAGACTGTATTACTGAGGCAAGCACCGAAATCCGCAAACTCTGCCCAGACAACAAAGCAGCCATCGTATGGTATGATCACTGCCTTTTGAAATACTCAAACATGAATTTCTTTGGTCAAGTTGATTATCAGAACAGGTTCTACATGTGGAACTTGAATAATGTAAGCTATCCAACATCATTTAATCAAAAGACAAAGGAGCTGCTAAGCCACCTTGCCCAGCAAGGTTTTGTCAACCAGAAAATGTATGCAGTTGGAGAATTAGAGCTTGAAGAATCCAAAAAACTATATGGATTGACTCAATGCACCAGGGATCTTTCCAGCAGTGATTGTAAGAAATGTCTTGATGATGCCATAAGTGAACTTCCAAGCTGTTGTGATGGGAAAGAAGGAGGGAGGGTTGTTGGGGGGAGTTGCAACATAAGATATGAGATTTACCCCTTCCTCGTTAATTCTTAG 801 0.4282 MLRFSPYKCCISLTMKPSPALSKMSFSRFASFLYLLSFVLLLQTVVGVDPLFHFCSSSEKFIDNGPYETNLNKLMGYLYLAAPPTGSGKGSVGQNHDQVNGLALCRGDVSNTDCKDCITEASTEIRKLCPDNKAAIVWYDHCLLKYSNMNFFGQVDYQNRFYMWNLNNVSYPTSFNQKTKELLSHLAQQGFVNQKMYAVGELELEESKKLYGLTQCTRDLSSSDCKKCLDDAISELPSCCDGKEGGRVVGGSCNIRYEIYPFLVNS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0642 266 FunFam Cysteine-rich receptor-like protein kinase 28 52 150 - -
Vvi12g0642 266 ProSiteProfiles Gnk2-homologous domain profile. 49 151 IPR002902 -
Vvi12g0642 266 ProSiteProfiles Gnk2-homologous domain profile. 157 262 IPR002902 -
Vvi12g0642 266 Pfam Salt stress response/antifungal 55 148 IPR002902 -
Vvi12g0642 266 Pfam Salt stress response/antifungal 170 259 IPR002902 -
Vvi12g0642 266 Gene3D - 48 151 IPR038408 -
Vvi12g0642 266 Gene3D - 157 262 IPR038408 -
Vvi12g0642 266 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 30 263 - -
Vvi12g0642 266 FunFam Cysteine-rich receptor-like protein kinase 10 159 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0642 Vvi-Chr12 7349620 7350420 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0642 51 265 Pollen Coat Proteome AT4G20670 39.732 3.18e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0642 - - vri:117926394 533.102