Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0638 ATGCCTTTCTCCAGATTTGCCTCCTTTCTGTGCCTGCTATCCTTTTTGCTCCTTCTCAATAATGCAGTTGGAGTTGACCCTCTCTTCCATTTCTGTACTGGCTCTGAGAAGTTCATTGACAATGGCCCATACGAAACCAACTTGAACAAACTCATGGATTCTCTCCAAATCCTAGCTCCTCCCACAGGTTTTGGAAAAGCTTCAGTTGGTTTGAACGCTGACCGATCAAATGGGCTTGCTCTCTGTAGACCTGATGTCTCAAACACAGACTGCAAAGCCTGTGTCACTGAGGCAAGCACCGAAATTCTCAAACGCTGTCCAGACTACAAAGCAGCAATCATATGGTATGATAATTGCCTTTTGAAATACTCCAACATGGATTTCTTTGGCCAAGTTGACCACCAAAAGTTCTACAGTTTCAATGAGAAAAATGTAAGCAATCCAGCATCATTTAATCAGAAAACAAGGGAGCTGCTAAGCCGCCTAGTAGAAGAAGCTTTTGTAGCCCCAAATATGTATGCAACTGGAGAAGTGGACCTTGAAGAGTCCAAGAAACTATATGGATTGGTTCAATGCACCAGGGACCTTTCAACCATTGATTGTAAACAGTGTCTTGATGATGCAGTAAGTGAAGTACCAAACTGTTGTGATGGGAAGGAAGGAGGTAGGGTTGCCACTGGGAGTTGCAACATAAGATATGAGACTTACCCCTTTGTGAAATCTTAG 726 0.4325 MPFSRFASFLCLLSFLLLLNNAVGVDPLFHFCTGSEKFIDNGPYETNLNKLMDSLQILAPPTGFGKASVGLNADRSNGLALCRPDVSNTDCKACVTEASTEILKRCPDYKAAIIWYDNCLLKYSNMDFFGQVDHQKFYSFNEKNVSNPASFNQKTRELLSRLVEEAFVAPNMYATGEVDLEESKKLYGLVQCTRDLSTIDCKQCLDDAVSEVPNCCDGKEGGRVATGSCNIRYETYPFVKS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0638 241 ProSiteProfiles Gnk2-homologous domain profile. 26 128 IPR002902 -
Vvi12g0638 241 Pfam Salt stress response/antifungal 32 125 IPR002902 -
Vvi12g0638 241 Pfam Salt stress response/antifungal 143 236 IPR002902 -
Vvi12g0638 241 Gene3D - 26 128 IPR038408 -
Vvi12g0638 241 Gene3D - 134 238 IPR038408 -
Vvi12g0638 241 ProSiteProfiles Gnk2-homologous domain profile. 133 238 IPR002902 -
Vvi12g0638 241 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 240 - -
Vvi12g0638 241 FunFam Cysteine-rich receptor-like protein kinase 10 135 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0638 Vvi-Chr12 7336012 7336737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0638 9 241 Pollen Coat Proteome AT4G20670 35.081 3.88e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0638 - - vvi:100853833 475.707