Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0632 ATGTGTAGAGGCAGAGAAGATGGAAAGCAAGGCCGTTTGGCCAAGTCCGAGGTACTCAAGGAGGCTGTTTCAGACGATGGTGGTGGTGGGCTGGTGTCCTGTGAGCTCTGCAGCTCCAGGGCACTGCTGTATTGTCAAGCAGATGATGCATTTTTATGCCAAAAATGTGATAGGTGGGTTCATGGAGCTAACTTTTTGGCGTTCAGGCACATTCGATGCTTGCTCTGCAGTACATGTCAAAATCTTACACAGCGATACCTCATAGGATCTTCACATGAGGTGGCGCTGCCAACCATGATTAGCTGGACAGAGCGAAGCTGGTGTAACTCAAGCGATGAGTCCAAGTGCCCAAGAACACTGAAGATGCCTTTTCTGTTTCTTTGA 384 0.4896 MCRGREDGKQGRLAKSEVLKEAVSDDGGGGLVSCELCSSRALLYCQADDAFLCQKCDRWVHGANFLAFRHIRCLLCSTCQNLTQRYLIGSSHEVALPTMISWTERSWCNSSDESKCPRTLKMPFLFL* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0632 127 SMART bboxneu5 29 75 IPR000315 GO:0008270
Vvi12g0632 127 CDD Bbox1_BBX-like 34 75 - -
Vvi12g0632 127 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 33 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0632 20 127 C2C2-CO-like Transcription Factor Family AT3G21890 44.915 3.82e-28 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0632 - - vvi:104880899 272.322