Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0590 ATGGGCCATGACGGAGCTCATCAACTGTCCACGTGCCTTCTAAAGATTAAGGAGGAGATCGATTTCATTGTGGGGTTCACTAGGCTAGTCAAAGAATTGAACGTCCCAAATCTCCCCTACCTCCAAGCGGTTGTAAAAGAAACCCTTAGATTCCACACATCAACACCGCTCATCATCAGAGAGTGCATCCAAGATTGCAAGATCGACAGCTATGATATCAAGGCCAATACACGCGTCATGATTAGTGTCTTTGCCATCATGCAGGACTCAAACTTGTGGGAAGATCCAAATGAGTTTATACCCGAGAGGTTCTTGGTCAACTTGTGTGAGAAAACGGTTGACCATGTGATGGAAATGAAAGGTCAGGATTTCAGGTACGTCCCATTTGGGAGTGGAATGAGAAGATGCCCTGGTGCTGCACTTGCATCGATGGTGATGCAGATAACAATCGGACGATTGGTTTAG 465 0.4602 MGHDGAHQLSTCLLKIKEEIDFIVGFTRLVKELNVPNLPYLQAVVKETLRFHTSTPLIIRECIQDCKIDSYDIKANTRVMISVFAIMQDSNLWEDPNEFIPERFLVNLCEKTVDHVMEMKGQDFRYVPFGSGMRRCPGAALASMVMQITIGRLV* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0590 154 PANTHER CYTOCHROME P450 98A9 14 154 - -
Vvi12g0590 154 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 129 138 IPR017972 GO:0005506|GO:0016705
Vvi12g0590 154 SUPERFAMILY Cytochrome P450 14 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 PRINTS E-class P450 group I signature 126 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 PRINTS E-class P450 group I signature 136 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 PRINTS E-class P450 group I signature 82 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 PRINTS E-class P450 group I signature 42 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 Pfam Cytochrome P450 15 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 Gene3D Cytochrome P450 10 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 PRINTS P450 superfamily signature 136 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 PRINTS P450 superfamily signature 127 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0590 154 PRINTS P450 superfamily signature 43 54 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0590 Vvi-Chr12 6885200 6885664 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0590 15 154 Cytochrome P450 AT2G42250 59.286 2.34e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0590 - - vvi:100263622 232.261