Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0589 ATGAACACTAGTACTACCTTCTACTTCTTTCCATACATCCTTTGTATCATTCCAAGCCTCTTCCTCATCTCCTTCCTCAAAACCCTGGTAAAACCTCCCAATGCATCTCGACCTCCATCTAGCCTCCCAATGCTCCCCATCATCGGCTACCTCCATCTCCTCACCACCAGTACCCTTCCCAAAAACTTTCAAACCCTAGCCGCTCGTTACGATCCCCTTATGCAGTTTCGTCTCAGTTCATCAACTTGTATCGTTGTATCCAACGTTACGATTGCTAAACAAGTCATGGAAACCCATGAACTAGCCTTCGCCTCCCGCCCTGAATTCAGTTCCTCAGACCACTTCATCTACAGAGGATCCAAGTTCATCATGGCAGAGTATGGCCCATACTGGCACTTCATGAAGAAACTGTGCCTAACAAAGCTTCTTGCTGTTCCCACCCTCGACCGCTTCAAACATATTGTAGAGAACAAAGAAAATTGGGAAAAAAACTTATGTTTTTCTCATTCACCTTGA 516 0.4535 MNTSTTFYFFPYILCIIPSLFLISFLKTLVKPPNASRPPSSLPMLPIIGYLHLLTTSTLPKNFQTLAARYDPLMQFRLSSSTCIVVSNVTIAKQVMETHELAFASRPEFSSSDHFIYRGSKFIMAEYGPYWHFMKKLCLTKLLAVPTLDRFKHIVENKENWEKNLCFSHSP* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0589 171 Gene3D Cytochrome P450 33 163 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0589 171 Pfam Cytochrome P450 39 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0589 171 PANTHER CYTOCHROME P450 93A3-LIKE 22 155 - -
Vvi12g0589 171 SUPERFAMILY Cytochrome P450 37 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0589 Vvi-Chr12 6873001 6873516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0589 35 159 Cytochrome P450 AT2G42250 52.800 1.49e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0589 - - vvi:100263622 252.292