Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0587 ATGGACACTGGTACTACCTTCTACTTCGTCCCATACATCCTTTGTATCATTCCAAGTCTCCTCCTCCTCTCCTTCCTCAAAACCCTAGTAAAACCTCCCACTGCATCTCGACCTCCACCCAGCCCCCCGACGCTCCCCATCATCGGTCACGTCCATCTTCTCACCTCCATCCTTCCCAAATGCTTCCAAACCCTAGCCTCCCGTTACGGTCCCCTTATGCAGCTTCGTCTCGGTTCATCAACTTGTATCGTTGTATCCAACGCTGCCGTTGCTAAAGAAGTCATGAAAACCCATGAACTAGCCTTCGCCTCTCGCCCTGAATTCGGGTCCTCAGAACACTTCATCTACAAAGGATCCAGGTTCATCATGGCGGAGTACGGCCCATACTGGCGCTTCATGAAGAAACTGTGTCTGACAAAGCTTCTCGCGGCTCCCACCCTCGATCGACTAATCCATATCCGAGAGGAAGAGATGGGAAAGCTCATGGACACACTGATTCAGAGGTCGAGGAAAGGGGAAGCTTCAGATTTGAGCAAGGAGCTGACAACGTTGACAAGCAATATCATATGCAGGATGGCGATGAGCACAAGGTGCAGTAGAAACGGTAATGAAGCTGAGGAGATGATGGAGTTGGTGAAGGGGGTGGTGGAGCTTGGAGGGAAGCTGTCTATAGGAGATGCTTTGGGGGCTTTGGGGAGACTAGACTTATTGGGATATGGGAAAAAGCTTGAAGCAAAGCTGAGGAAATTTGACAGTTTGGTGGAGAAGATCATGGAGGAGCATCAGAGGAAAAATGGGATGGTGAAAGGTAACGGAAGAGAAGGGAGAGATCTTATGGATATTCTACTGGAGATCCATGAAGACCCTTCTGCTGAATTGAAGTTGACCAGGACTGACATCAAGTCTTTCTTCCTTGACATATTACTGGCAGGAACTGACACTCAATCAGTGGCCACACAATGGGCCATGGCGGAGCTCATCAACCGTCCACGTGTCTTCAACAAGCTCAGAGAGGAAATTGATTCAATTGTGGGGTCCACTAGGCTGGTCAAAGAATCGGACGTCCCAAATCTCCCCTACCTCCAAGCGGTTGTCAAAGAAACCCTTAGACTCCACACATCAGCACCGTTCATCCTCAGACAGTGCATTCAAGATTGCAAGATTGACGGCTATGATATCAAGGCCAATACACGTGTCATGATTAGCGCCTTTGCCATCATGCAGGACCCGAACTCGTGGGAAGATCCAAGTGAGTTTATACCCGAGAGGTTCTTGGTCAACTCGGGTGAGAACATGGTTGACCATGTGACTGAAATCAAGGGCCAGGATTTTAGGTATGTCCCATTTGGGAGTGGAAGGAGAGGATGCCCTGGTGCTGCACTTGCAATGATGGTGATGCAGATGACAATCGGACGGTTGGTTCAATGCTTTGACTGGAGAGTCAAAGATGGGGAAAAGGTTGATTTGAATGTAGGCCCAGGATTTTCAGCTGAAATGAAAACCCCACTTGTGTGTTTTACAAGCATACACTTTGATCCCCTTGGCGAAGTATATGCAAGGCACGTGGAAGGGTGA 1575 0.4902 MDTGTTFYFVPYILCIIPSLLLLSFLKTLVKPPTASRPPPSPPTLPIIGHVHLLTSILPKCFQTLASRYGPLMQLRLGSSTCIVVSNAAVAKEVMKTHELAFASRPEFGSSEHFIYKGSRFIMAEYGPYWRFMKKLCLTKLLAAPTLDRLIHIREEEMGKLMDTLIQRSRKGEASDLSKELTTLTSNIICRMAMSTRCSRNGNEAEEMMELVKGVVELGGKLSIGDALGALGRLDLLGYGKKLEAKLRKFDSLVEKIMEEHQRKNGMVKGNGREGRDLMDILLEIHEDPSAELKLTRTDIKSFFLDILLAGTDTQSVATQWAMAELINRPRVFNKLREEIDSIVGSTRLVKESDVPNLPYLQAVVKETLRLHTSAPFILRQCIQDCKIDGYDIKANTRVMISAFAIMQDPNSWEDPSEFIPERFLVNSGENMVDHVTEIKGQDFRYVPFGSGRRGCPGAALAMMVMQMTIGRLVQCFDWRVKDGEKVDLNVGPGFSAEMKTPLVCFTSIHFDPLGEVYARHVEG* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0587 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vvi12g0587 524 Gene3D Cytochrome P450 29 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 CDD CYP93 70 506 - -
Vvi12g0587 524 Pfam Cytochrome P450 39 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 SUPERFAMILY Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 FunFam Cytochrome P450 family protein 31 505 - -
Vvi12g0587 524 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 20 502 - -
Vvi12g0587 524 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0587 524 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0587 Vvi-Chr12 6865075 6866746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0587 1 512 Cytochrome P450 AT2G42250 54.951 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0587 - - vvi:100263622 994.186