Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0487 ATGTTGTCTTCCACGGTCATGAGCGTCTCGCCGGGAGTCCCGACGCCCTCGTCTCTAACTCCACCGTCTCCTCCCTCGTCCTCCCCCGTTCGCGCGATTCCTGGCAGCTACGGCTGGCCTGTGCTCGGCCCGATCGCCGACCGCCTCGACTACTTCTGGTTCCAGGGCCCGGAGACGTTCTTCCGGAAGAGGATCGACAAGTACAAGAGCACCGTGTTCCGTACCAACGTCCCTCCGTCGTTCCCCTTCTTCGTCGGTGTCAATCCTAACGTAATCGCCGTCCTCGATTGCAAATCCTTCTCCTTTCTCTTTGATATGGATGTTGTCGAGAAGAAGAATGTCCTCGTCGGCGACTTCATGCCCAGCGTCAAGTACACCGGCGACATTCGAGTCTGTGCCTATCTCGACACCGCCGAGACCCAACACGCCAGGGTAAAGAGCTTTGCCATGGACATTCTGAAACGGAGTTCCAGCATCTGGGCAAGCGAGGTCGTGGCCAGCCTGGACACCATGTGGGACACCATCGACGCCGGCGTCGCCAAGAGCAACAGCGCCAGTTACATCAAGCCTCTCCAGCGCTTCATCTTCCATTTCCTAACTAAATGCCTTGTTGGCGCGGATCCCGCTGTGTCGCCGGAAATTGCGGAGTCTGGCTACGTCATGCTCGACAAATGGGTTTTCCTCCAGCTCCTCCCCACCATCAGCGTCAACTTCCTGCAACCACTCGAAGAGATCTTCCTCCACTCTTTCGCTTACCCATTCTTCCTCGTCAAAGGAGACTACAGAAAACTCTACGACTTCGTCGAACAACACGGCCAAGCCGTGCTTCAAAGAGGCGAAACCGAGTTCAACCTCTCCAAAGAAGAAACCATCCACAACCTCCTCTTCGTCCTCGGCTTCAACGCCTTCGGTGGCTTCACCATCTTCTTCCCATCTCTCCTCAGCGCTCTTAGCGGCAAACCGGAGTTACAGGCCAAACTGAGAGAAGAGGTCAGATCAAAGATCAAGCCGGGAACAAATCTAACCTTTGAATCGGTTAAAGACTTGGAACTAGTCCACTCCGTCGTGTACGAAACTCTCCGCCTCAACCCGCCCGTCCCACTCCAATACGCTCGAGCCAGAAAGGACTTTCAACTGAGTTCACACGACTCAGTTTTTGAGATAAAGAAGGGAGATCTGCTTTGCGGGTTCCAGAAGGTGGCGATGACAGACCCGAAGATCTTCGACGACCCGGAAACTTTCGTACCGGACCGGTTTACGAAAGAGAAGGGGCGGGAGTTACTGAATTATCTCTTCTGGTCGAACGGGCCCCAGACCGGTTCACCCAGCGACAGGAACAAGCAGTGCGCGGCCAAGGACTATGTCACCATGACCGCTGTCCTATTCGTGACTCACATGTTTCAGCGCTACGATTCTGTCACGGCTAGCGGTTCTTCTATCACCGCCGTTGAGAAAGCTAACTGA 1464 0.5492 MLSSTVMSVSPGVPTPSSLTPPSPPSSSPVRAIPGSYGWPVLGPIADRLDYFWFQGPETFFRKRIDKYKSTVFRTNVPPSFPFFVGVNPNVIAVLDCKSFSFLFDMDVVEKKNVLVGDFMPSVKYTGDIRVCAYLDTAETQHARVKSFAMDILKRSSSIWASEVVASLDTMWDTIDAGVAKSNSASYIKPLQRFIFHFLTKCLVGADPAVSPEIAESGYVMLDKWVFLQLLPTISVNFLQPLEEIFLHSFAYPFFLVKGDYRKLYDFVEQHGQAVLQRGETEFNLSKEETIHNLLFVLGFNAFGGFTIFFPSLLSALSGKPELQAKLREEVRSKIKPGTNLTFESVKDLELVHSVVYETLRLNPPVPLQYARARKDFQLSSHDSVFEIKKGDLLCGFQKVAMTDPKIFDDPETFVPDRFTKEKGRELLNYLFWSNGPQTGSPSDRNKQCAAKDYVTMTAVLFVTHMFQRYDSVTASGSSITAVEKAN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0487 487 MobiDBLite consensus disorder prediction 15 29 - -
Vvi12g0487 487 PRINTS E-class P450 group IV signature 349 365 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0487 487 PRINTS E-class P450 group IV signature 386 400 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0487 487 PRINTS E-class P450 group IV signature 402 420 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0487 487 PANTHER CYTOCHROME P450 26 29 470 - -
Vvi12g0487 487 Gene3D Cytochrome P450 28 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0487 487 MobiDBLite consensus disorder prediction 1 29 - -
Vvi12g0487 487 Pfam Cytochrome P450 314 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g0487 487 CDD CYP74 62 479 - -
Vvi12g0487 487 FunFam Allene oxide synthase, chloroplastic 28 486 - -
Vvi12g0487 487 SUPERFAMILY Cytochrome P450 28 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0487 Vvi-Chr12 5973055 5975632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0487 106 486 Cytochrome P450 AT4G15440 54.569 9.18e-161 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0487 K10528 - vvi:100251750 936.406