Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0409 ATGAAGGGGATCTCCAGAGCAAAGAGGCTAAAAAACAACAAAAGCAGAATTCAGCCTCCAATTTTTTCAGTGAAGAAGAGGCTGCAATTGTCATCCAGTCAGCATTTAGAGGCTTTCTGGTTAATCCACATAGCTAGGCGTCGAAATGAAGGAACAAAAGTAATGGATGGTGGGCAGGAGCTTCTTCTAGGAATAGAAAATCCAAGTAGGGAGTCTGTGGACACATCACTGGAAGTCCAAACAGGAAATTCTGTGGAAGTTCTCTCAGATGGGGAGGGAAGCGTTGCGGCTCATGCTCGGATGCAGCATAAAGCCAGAGCTCAAGCAACCAAGTTTAAGGACGACTGGGATGATAGCACAGTGAGTAGCAAGGTGTTAAAAATGAGAATTCAGAACAGGATGGAGGCGACAACCAGGAGAGAAAGAGCTCTAGCCTATGCTTTTGCACAACAGTTGCGAATCTGTTCGAAGAAAAAACAAACTAGATCTGATGGTGAAGAAACAAACATGGGTTGGAGCTGGCTAGAGCGGTGGATGGCGACTCGCCTTCCTGGAAGCTCCTCAGTTGAAGATCATGTAAGTGGGCAGCTAGAGCCAACTATGAGCATTCAAAGCTCAGTGATGAGGAAGAACTTTTTCGATGTTGGGGGAGAAGAAAGGGAGAGTTGTGGATCTAATGAGGTTGCTGCTCAGATTGATAATTTTCCTGTGATTTCCCCAAAAGTGAAAGATAGCTCTAAGCACCTAAGCTCAGGCTTAAGGTTACAAGAGGTGTGTCGAGGCGAAAAACTGTGCCAAACAATCACTGCCCAAAAGAGAATACCAAGGTAG 831 0.4549 MKGISRAKRLKNNKSRIQPPIFSVKKRLQLSSSQHLEAFWLIHIARRRNEGTKVMDGGQELLLGIENPSRESVDTSLEVQTGNSVEVLSDGEGSVAAHARMQHKARAQATKFKDDWDDSTVSSKVLKMRIQNRMEATTRRERALAYAFAQQLRICSKKKQTRSDGEETNMGWSWLERWMATRLPGSSSVEDHVSGQLEPTMSIQSSVMRKNFFDVGGEERESCGSNEVAAQIDNFPVISPKVKDSSKHLSSGLRLQEVCRGEKLCQTITAQKRIPR* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0409 276 PANTHER IQ-DOMAIN 5-RELATED 95 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0409 Vvi-Chr12 5150288 5151652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0409 43 235 IQD Protein Family AT5G35670 46.154 1.91e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0409 - - vvi:100241471 462.225