Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0397 ATGTCGAATTGTGTGGTACTGGAACTCCATAGAAACTCTACCAACTGGGCTAAGGTGGTGGAAGACATTGTGAGATTGGAGAAGAAAATATTCCCTAAACACGAATCACTCGCTAGATCATTTGATGAAGAACTGAGGAAAAACAACTCTGGCTTGCTCTATATTCAGCTTGCTGATGGAGAAGTTGCAGGATACGTCATGTACTCATGGCCCTCTTCCTTGCTTGCTTCCATCACGAAACTCGCAGTGAAGGAGAATTACAGGAGGCAAGGCCATGGAGAAGCACTGCTGGAAGCAGCAATTCAGAAATGCAAAACTAGAAATATCTGCCGGATATCGCTTCATGTGGATCCTTCAAGGACTCCTGCAATGAGTCTCTACAAGAAACATGGTTTCCAAGTTGATAACCTGATCAAAAGCTACTACTCTTCAGACAGAGATGCCTATAGAATGTACTTAGATTTCGATGTCGACTAG 477 0.434 MSNCVVLELHRNSTNWAKVVEDIVRLEKKIFPKHESLARSFDEELRKNNSGLLYIQLADGEVAGYVMYSWPSSLLASITKLAVKENYRRQGHGEALLEAAIQKCKTRNICRISLHVDPSRTPAMSLYKKHGFQVDNLIKSYYSSDRDAYRMYLDFDVD* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0397 158 Gene3D - 17 154 - -
Vvi12g0397 158 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 155 IPR016181 -
Vvi12g0397 158 CDD NAT_SF 53 115 - -
Vvi12g0397 158 Pfam Acetyltransferase (GNAT) family 21 132 IPR000182 GO:0016747
Vvi12g0397 158 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 7 156 IPR000182 GO:0016747
Vvi12g0397 158 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 156 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi12g0397 Acetyltransf_1 4.1e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0397 - - vvi:100265407 320.857