Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0353 ATGGCGTCTGGATCATCTGGTCGAGCGGGGTCCGGTTCGAAGGGGTTTGATTTCGCGTCCGATGATATTCTGTGTTCGTACGACGAGTTTTCCAATCAGGAGAGCTCTAATGGGACTCACTCCGATCCCGCTTCTGGAAAGGATTTTCATAAAGCCAGAATGTCGAGATCATCACTTTTTCCTGCTAGTAATGTCTATGGTCAGCAAGAAGAATCATCACTCAACCAGGAGATGATTTCTACTGTTGAAAAAACTGTGAAAAAATATGCTGATAATCTCATGCGTTTTCTCGAAGGAATTAGCTCACGCCTATCACAGTTGGAATTGTATTGCTACAATCTTGACAAGTCAATTGGAGAAATGCGATCTGATTTAGTTCGTGATCATGGGGAGGCAGACTCGAAGCTCAAATCTCTTGATAAGCATATTCAGGAAGTGAGTTACAATTAA 450 0.4267 MASGSSGRAGSGSKGFDFASDDILCSYDEFSNQESSNGTHSDPASGKDFHKARMSRSSLFPASNVYGQQEESSLNQEMISTVEKTVKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLVRDHGEADSKLKSLDKHIQEVSYN* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0353 149 MobiDBLite consensus disorder prediction 30 51 - -
Vvi12g0353 149 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 4 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0353 Vvi-Chr12 4618610 4622690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0353 62 146 Trihelix Transcription Factor Family AT5G14540 30.588 4.36e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0353 - - vvi:100264321 285.034