Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0349 ATGGACAAGCCTTTGCTCGACGGAGAAAGCAGCGGCGGCCGCCGGAGAGGCCAGACACCGGTGTTCCATCGGAGGTCCGATGCCATCGCCTATGGCTCGCCCTACCAGAAGGCCGCCGCCCTTGTCGATCTGGCTGAGGATGGTATTGGTCTACCAGAGCAAATGCTTGATCAGGAAAGCTTTGAAAGTGCAGCAAAGTTCTACTTCATTTTTATTCGGTTCAATTTTCTCTGGTCCCTCAATCTTTTCGCCTTGATAGTTCTAAATTTCCTTGAGAAACCCTTGTGGTGTGCCAAACAAACAACATACTCTTGCAATGACAGGGAGTACTACTTTCTTGGGCAGTTGCCGTACTTAACTAGTGTCGAGTCTCTTATCTATGAGGGCATAACACTCGTAATAATTTTGTTACATACGTTCTTTCCAATATCATATGAAGGATCCCAGATATACTGGAAAAACCCTCTTAATAGATTGAAGGTCATTTTGCTGTCCATATTGGTTGCTGATTTGTTGGTTTATGTTCTTTACTTGTCACCACTTCCCTTCTATTATCTTCCTTTTAGGCTTGCACCATATATACGGGTCATTCTTTGCATTCTAAATATCAGGGAAGTACGAGCAACTATGGTTATTCTAGCTGGAATGCTTGGCACATACCTAAACATCATGGCTCTAGGACTATTGTTTCTTCTGTTCGCAAGTTGGGTAGCATATGTCATGTTTGAAGATACCCAACAGGGAAAGACAGTGTTTACTTCATACCTAACTACATTGTATCAAATGTTTATTTTATTCACCACATCCAATAACCCAGATGTATGGATTCCAGCATACAAGGTTTCACGTTGGTATTGCCTGTTTTTTGTTTTATACATGCTATTGGGAGTTTACTTCATGACCAACTTGATCCTTGCTGTTATATACGACAGCTTCAAAAATCAGCTTGCAAAACAAGTTGCTGAAATGGACCGAATGAGAAGAAGAATATTGGAGAAAGCCTTTAATCTCATAGATAAATCTAATCTTGGATTTCTGAAAAAAGAGCAATGTATTCACCTATTTGAAGAATTGAATAAATACAGGTATAACTTGTCCTTGCTGTTTTCCTTCTATTTTACTTCTACTTGA 1131 0.4032 MDKPLLDGESSGGRRRGQTPVFHRRSDAIAYGSPYQKAAALVDLAEDGIGLPEQMLDQESFESAAKFYFIFIRFNFLWSLNLFALIVLNFLEKPLWCAKQTTYSCNDREYYFLGQLPYLTSVESLIYEGITLVIILLHTFFPISYEGSQIYWKNPLNRLKVILLSILVADLLVYVLYLSPLPFYYLPFRLAPYIRVILCILNIREVRATMVILAGMLGTYLNIMALGLLFLLFASWVAYVMFEDTQQGKTVFTSYLTTLYQMFILFTTSNNPDVWIPAYKVSRWYCLFFVLYMLLGVYFMTNLILAVIYDSFKNQLAKQVAEMDRMRRRILEKAFNLIDKSNLGFLKKEQCIHLFEELNKYRYNLSLLFSFYFTST* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0349 376 Coils Coil 309 329 - -
Vvi12g0349 376 Pfam Ion transport protein 131 315 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vvi12g0349 376 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 362 IPR044581 GO:0005245
Vvi12g0349 376 Gene3D - 212 343 - -
Vvi12g0349 376 FunFam Two pore calcium channel protein 1 205 316 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0349 1 362 Ion Channels AT4G03560 66.575 8.02e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0349 K16900 - vvi:100233073 691.419