Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0348 ATGATAGCTGTCATCCTTGTACTGAATCTAGTTGCTGTTATTATTGAAACAACGCTTGATATAGAGAACAATTCTGCTCAGAAGGTTTGGCAGAAGGTAGAGTTTGTCCTTGGGTGGATATATGTCCTGGAAATGGCTCTAAAAGTTTTTGCATTTGGATTTAAGAACTATTGGAGGGATGATTCAAATCGCTTTGATTTCTTTATAACATGGATAATAGTGATCGGAGAAACTGCAACTTTTGTGGCTCCCAGCAGCCTGAGTTTTCTTTCAAATGGGGAATGGATCCGGTACCTTCTTCTTGCAAGAATGTTGCGATTAATAAGACTCTTGATGCGCGTCAAACAGTACCGAGCCTTTATTGCCACATTCTTAAACCTCATACCAAGTTTGATGCCGTACCTCGGGACCATATTTTGTGTCCTCTGTATATATTGCTCTCTTGGCGTACAGATCTTCGGTGGGATTGTGAACAATGGGAACTCCAATTTGGAAGGAACTGATCTTGAGGAGTCTGACTATCTACTTTTCAATTTTAATGACTACCCAAATGGGATGGTGACACTTTTCAATCTGTTAGTCATGAACAACTGGCAAGTGTGGATGCAGAGCTACAAGGATTTGACAGGAACATCGTGGACTCTCGTATACTTTATCAGCTATTACCTATTAACAGTATTACTGCTTTTGAATTTGGTTGTAGCATTTGTTTTGGAGGCTTTCTTTGCTGAAATGGACCTTGAGAAGTCAGAAAATTGTGGAGAAGACGGCAAGGAAGCAGGAGAAAAGCAGCGCAGATATACCCGTTCAAGAATACGGAGTCAGAGAGTGGATATCCTTCTCCACCACATGTTGAGTGCAGAGCTGAATCAAACGGAGTCCTGA 885 0.4124 MIAVILVLNLVAVIIETTLDIENNSAQKVWQKVEFVLGWIYVLEMALKVFAFGFKNYWRDDSNRFDFFITWIIVIGETATFVAPSSLSFLSNGEWIRYLLLARMLRLIRLLMRVKQYRAFIATFLNLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNNGNSNLEGTDLEESDYLLFNFNDYPNGMVTLFNLLVMNNWQVWMQSYKDLTGTSWTLVYFISYYLLTVLLLLNLVVAFVLEAFFAEMDLEKSENCGEDGKEAGEKQRRYTRSRIRSQRVDILLHHMLSAELNQTES* 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0348 294 FunFam Two pore calcium channel protein 1 1 120 - -
Vvi12g0348 294 FunFam Two pore calcium channel protein 1 121 276 - -
Vvi12g0348 294 Pfam Ion transport protein 2 241 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vvi12g0348 294 Gene3D - 121 280 - -
Vvi12g0348 294 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 293 IPR044581 GO:0005245
Vvi12g0348 294 SUPERFAMILY Voltage-gated potassium channels 2 241 - -
Vvi12g0348 294 Gene3D - 1 120 IPR027359 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0348 2 293 Ion Channels AT4G03560 71.331 1.38e-154 447
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0348 K16900 - tcc:18608710 446.047