Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0329 ATGGAGTTTCTCAAGACGTCTTTGCTCCTTCTTGCGATTTTTATGGCGTTTCTGTGTTCATCTCAAGGTTATGTATTTTATGTTGGCGGCAAACAAGGGTGGTCGGCGAACCCTTCTGAGGATTACGTTCAGTGGGCTGAGAGGAACCGCTTTCAAGTCAATGATACTCTCGTTTTCAAGTATGAGAAAGGACAGAACTCAGTGTTGGTGGTGAACAGAGAGGATTACTACAAGTGCAACGTCGAGAATCCGATTAATAAGTACACTGACGGCAACACAGAGTTCAAGTTGGACCGCTCCGGTTCCTTCTTCTTCATCGGTGGCAACGCTGACTACTGCCAGAAGGGCCAGAGGCTCATCGTCGTCGTATTGGCCGTCCGAAATGAGACTCAAACTCCTACTCCTACTCCATCCGTCCCTGGAAACCCACCGGTGCTGTCTCCCCCTAGTGAGTCACCGGAGGGCAGTCCGAGCCCTGCTTCGTCCCCGGCTGGGGATGAGAATTCTCCGGCGCCGGCACCCCACGGGTCTGCACCAGGGTTGACTAGGCCGGTGGTTTGGGTTTTAGGCGTTGGGTTTGGTGTGAGCGTGGTTTTGGGCAACTTCGTTGGGTTGTACATTTAG 624 0.524 MEFLKTSLLLLAIFMAFLCSSQGYVFYVGGKQGWSANPSEDYVQWAERNRFQVNDTLVFKYEKGQNSVLVVNREDYYKCNVENPINKYTDGNTEFKLDRSGSFFFIGGNADYCQKGQRLIVVVLAVRNETQTPTPTPSVPGNPPVLSPPSESPEGSPSPASSPAGDENSPAPAPHGSAPGLTRPVVWVLGVGFGVSVVLGNFVGLYI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0329 207 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Vvi12g0329 207 MobiDBLite consensus disorder prediction 136 156 - -
Vvi12g0329 207 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Vvi12g0329 207 PANTHER BLUE COPPER PROTEIN 25 139 IPR039391 GO:0009055
Vvi12g0329 207 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
Vvi12g0329 207 MobiDBLite consensus disorder prediction 131 177 - -
Vvi12g0329 207 CDD OsENODL1_like 24 124 IPR041846 -
Vvi12g0329 207 Gene3D - 23 128 IPR008972 -
Vvi12g0329 207 ProSiteProfiles Ig-like domain profile. 1 98 IPR007110 -
Vvi12g0329 207 FunFam Early nodulin-like protein 1 23 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0329 Vvi-Chr12 4237697 4238424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0329 1 179 Phytocyanin Superfamily AT5G53870 48.913 1.89e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0329 - - vvi:100267820 350.903