Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0322 ATGGCGGATGGATCACAGCATTCGTCAATATTTCAGAAAATAAATGGGCAGTCTTATCTCTTTTCTACATTGTCGCCTAATTTGCAGTCCAGAAATACCAGTGTACACAGTCTGAGCAGTGCCTATGTGAATGGAGGTTTGCAGACTTCTTTGCTGCCAGCAGGCAGTGGCAATGGCCTGGCCCTTGTATCACCCTTGTCTCCCATCTTTGCTCATGCTCCTGCGGAGAAAGGTGCAAAAGGTTTTATGATTGATTTCCTCATGGGAGGAGTTTCTGCTGCAGTCTCCAAGTCAGCTGCTGCACCAATTGAGCGAGTTAAGCTCTTGATTCAGAATCAGGATGAGATGATTAAGGCTGGCAGGTTGTCTGAACCATACAAGGGAATTACTGACTGCTTTGCCAGAACTATTAAGGATGAAGGTGTCATTTCCCTTTGGAGAGGCAACACTGCTAATGTTATTAGATATTTCCCCACTCAGGCCCTGAACTTCGCTTTCAAGGATTACTTCAAGAGACTCTTCAACTTCAAGAAAGACAGGGATGGCTACTGGAAATGGTTTGCTGGGAACTTGGCATCAGGTGGTGCTGCTGGTGCTTCTTCTCTTCTATTTGTTTATTCCCTAGATTATGCCCGTACACGTTTGGCCAATGATGCTAAGGCTGCTAAAAAGGGTGGTGAAAGGCAATTTAATGGTTTGATTGATGTGTACAAGAAAACCATCAAATCTGATGGCATTGCGGGGCTTTATCGTGGATTCAACATCTCATGTGTTGGAATTATAGTGTACCGTGGGCTCTATTTTGGAATGTATGATTCACTGAAACCTGTGGTCCTGGTTGGTGAGATGCAGGATAGTTTCTTGGCTAGTTTCTTGCTGGGATGGGGAATCACAATTGGTGCAGGATTGGCTTCTTACCCAATTGATACAGTGCGTAGAAGGATGATGATGACCTCAGGAGAAGCTGTCAAATACAAGAGCTCTTTCGATGCATTCTCACAGATCCTGAAGAATGAAGGTGCTAAATCACTCTTTAAAGGCGCCGGTGCAAACATCCTGCGTGCTGTTGCAGGTGCTGGTGTGCTTGCTGGTTATGATAAGTTGCAGCTCCTTGTACTTGGCAAGAAATATGGATCCGGTGGTGGCGGCTAA 1152 0.4531 MADGSQHSSIFQKINGQSYLFSTLSPNLQSRNTSVHSLSSAYVNGGLQTSLLPAGSGNGLALVSPLSPIFAHAPAEKGAKGFMIDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGITDCFARTIKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTIKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGEMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGGG* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0322 383 Pfam Mitochondrial carrier protein 81 177 IPR018108 -
Vvi12g0322 383 Pfam Mitochondrial carrier protein 184 277 IPR018108 -
Vvi12g0322 383 Pfam Mitochondrial carrier protein 285 372 IPR018108 -
Vvi12g0322 383 SUPERFAMILY Mitochondrial carrier 80 367 IPR023395 -
Vvi12g0322 383 Gene3D Mitochondrial carrier domain 83 378 IPR023395 -
Vvi12g0322 383 PRINTS Mitochondrial carrier protein signature 98 112 IPR002067 GO:0055085
Vvi12g0322 383 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Vvi12g0322 383 PRINTS Mitochondrial carrier protein signature 85 98 IPR002067 GO:0055085
Vvi12g0322 383 PRINTS Mitochondrial carrier protein signature 294 316 IPR002067 GO:0055085
Vvi12g0322 383 PRINTS Mitochondrial carrier protein signature 250 268 IPR002067 GO:0055085
Vvi12g0322 383 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Vvi12g0322 383 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 79 381 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi12g0322 383 PRINTS Adenine nucleotide translocator signature 159 171 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi12g0322 383 PRINTS Adenine nucleotide translocator signature 185 198 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi12g0322 383 PRINTS Adenine nucleotide translocator signature 82 94 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi12g0322 383 PRINTS Adenine nucleotide translocator signature 290 306 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi12g0322 383 PRINTS Adenine nucleotide translocator signature 126 147 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi12g0322 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 173 IPR018108 -
Vvi12g0322 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 185 277 IPR018108 -
Vvi12g0322 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 371 IPR018108 -
Vvi12g0322 383 FunFam ADP,ATP carrier protein, mitochondrial 83 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0322 Vvi-Chr12 4174775 4176738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0322 3 373 Antiporters AT4G28390 83.333 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0322 K05863 - vvi:100262663 702.59