Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0308 ATGATCTGGGTAATTGGATCTATCACTGGGGTTAGGCTCCTCATTGACACCTTTCCTGAAGTGGGATTTGGGCCACGTTTGATTGTTGACATCCATCATGGTGCACTGACAGAAGGGTTTCTGACATTTTCAATTGTTATGATCTCGGTGACTAAATCTTTTTGGCCTTATGTAGGTAATGGGATGGGCTTATGCTCGCGGGGATCATATAACCAAGGAGCATATACTTGTTTACTGGCTTGCCCCAATGGAGGCACTCTACTGGCAGTCTGGACATTCCGGTTGCTGGTTCAGCCACACAAGGAGGAGAAAGAAAAAATGAAGGCTAATTGTCAATGTTCATTTGTCAAGGTTGAGTAG 360 0.4472 MIWVIGSITGVRLLIDTFPEVGFGPRLIVDIHHGALTEGFLTFSIVMISVTKSFWPYVGNGMGLCSRGSYNQGAYTCLLACPNGGTLLAVWTFRLLVQPHKEEKEKMKANCQCSFVKVE* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0308 119 PANTHER AQUAPORIN SIP2-1-RELATED 4 51 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0308 Vvi-Chr12 3976650 3977196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0308 4 112 Major Intrinsic Protein MIP AT3G56950 39.007 6.23e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0308 K09875 - vvi:100246584 119.012