Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0296 ATGGAGGAAGCTACCAATGGGGAACCAAATGAAGAGTTTTTGAAAATTAAGAAAGGGTTGTTGCAAAGTGACGAGTTACTTCAGTATATTTTGGAGACTAGTGTGTATCCAAGGGAGCCACAACCTCTCAAAGAAATAAGGGATGCAAGTGCACACCATCAAAAGAAGATGATGCTGACAACACCTGATGCTGGACAATTAATGGTCTTGCTCTTAAAGCTTATTAATGCAAAGAAGACAATTGAGATTGGAGTATTCACTGGATATTCTCTTCTTCTTACTGCTATTTCAATACCTGATGATGGCAAAATAATAGCCATTGATATAGATCGAGAGGCATTTGAACTAGGGTTTCCCATTATCGAAAAGGCTGGTGTGCAACATAAAATCGACTTTATCGAGGCTCCTGGTCTTGAAGTGCTTGATAGACTCTTAGAAGATCCCAATAATGAAGACTCGTTCGATTATGTTTTTGTGGATGCGGACAAGGATAACTATATAAACTACCACGAGAAGTTGATGAAGTTGGTGAAGATTGGTGGATTAATTCTATATGATAATACACTTTGGTTCGGAACAGTAGCCTTACCAAACTGTTTGGTTCCTGAGAAAATGAAGTATAATAGAGATCATATTATCAAGTTTAACAAGGCCTTGTCAGATGATTCCCGAATACAAATATCACAAGTCCCGGTTGGTGATGGACTCACAATATGTCGTCGCCTTTACTAA 732 0.3839 MEEATNGEPNEEFLKIKKGLLQSDELLQYILETSVYPREPQPLKEIRDASAHHQKKMMLTTPDAGQLMVLLLKLINAKKTIEIGVFTGYSLLLTAISIPDDGKIIAIDIDREAFELGFPIIEKAGVQHKIDFIEAPGLEVLDRLLEDPNNEDSFDYVFVDADKDNYINYHEKLMKLVKIGGLILYDNTLWFGTVALPNCLVPEKMKYNRDHIIKFNKALSDDSRIQISQVPVGDGLTICRRLY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0296 243 PANTHER O-METHYLTRANSFERASE-RELATED 17 242 - -
Vvi12g0296 243 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 19 242 IPR002935 GO:0008171
Vvi12g0296 243 Pfam O-methyltransferase 32 242 IPR002935 GO:0008171
Vvi12g0296 243 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 241 IPR029063 -
Vvi12g0296 243 CDD AdoMet_MTases 81 185 - -
Vvi12g0296 243 Gene3D Vaccinia Virus protein VP39 13 243 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0296 Vvi-Chr12 3887686 3889380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0296 18 243 Monolignol Biosynthesis Gene Families AT4G26220 59.735 3.96e-102 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0296 K00588 - vvi:100266060 486.493