Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi12g0292 | ATGATTCTCTTACTTCTCTTGTTTCTCTCTCTACCTCACGCTCTCTCTCTAAACCAGGAGGGCCTTTATCTCCTTAAAGCCAAAGAAGGACTCGACGACCCATTCGGTGCCCTCTCCTCTTGGAAGGCCCGAGACGAGTTACCATGTAATTGGAAAGGAATCGTCTGCGACTCACTCAACCGGATCAACTCGGTCAATCTCTCTAGCACAGGCGTCGCCGGACCCTTTCCCAGCTTCCTTTGCCGACTCCCTTTCCTCTCCTCCATTGATCTCTCCAACAATTCCATTGACTCATCTGTTGCCGTCGATTTCGGAGCGTGTCAGCATATCAAGTCCCTGAACCTATCTGATAACTTGCTGGTGGGCTCTATCCCTGCTTCGCTTTCCAGAATTTCAGATTTGCGCGAACTCGTTCTAAGTGGAAACAATTTTTCCGGGGAGATTCCGGCGAGTTTCGGTGAGTTTCGGCGACTTGAGAGGCTGTGTCTTGCTGGAAATCTTCTCGATGGTACGATACCTTCTTTTCTTGGTAACATTTCGAGTCTCAAAGTTCTGGAACTCGCTTATAATCTATTCAGGCCGAGTCAACTCAGCCCAGAACTCGGTAACTTGAGGAATCTGGAAGTTCTCTGGATCAGCAACTCGAACCTCTTTGGTGAGATCCCGGCGAGTTTTGGCCAATTGACTCTCTTAACAAATTTGGACTTGTCCTCAAACCAGCTCAATGGTTCGATACCGAGCTCGCTCAGTGGGTTATCCAGAATTGTTCAGATTGAGCTCTACAGCAACTCGTTATCAGGCGAGTTGCCGGCGGGAATGTCGAATTGGACGAGGTTGCTACGACTGGACGCGTCAATGAACAAGCTTGAAGGTCCAATTCCGGAGGAGTTGTGCGGATTACAACTTGAATCACTGTCACTGTACCAAAACCGATTCGAAGGGTTTTTACCAGAGAGTATAGCTGGGTCGAAAAACTTATACGAACTCAGATTGTTCGACAATCGACTCAGAGGAAGATTACCAAGTGAGCTTGGAAAGAACTCCCGTTTAAACACTCTGGATGTGTCCAGCAATCACTTTTTCGGCGAAATTCCGGCGAATTTATGCGCAAATGGAGCTTTAGAAGAACTTCTTATGATTAAAAATTCTTTTTCAGGGAATATTCCAGCGAGTCTCGAGAAATGCCAGACCCTGAGACGTGTTCGGTTGAGCTACAACCAGCTCTCCGGCGAGGTTCCGCCGGAAATATGGGGTTTACCCCATGTCTATCTGCTTGATCTAAGTGTTAATTCACTGTCTGGGCATATCTCTAACTCGATCTCCGGTGCTCACAACCTTTCTAGTCTGTCAATTTCAAGTAACCAGTTCTCTGGATCGCTTCCCAGTGAAATCGGATCGTTGAGGAACCTTGGTGAATTTTCGGCCAGCCAAAACAAGATAACAGGCAAGATTCCGCAGACTTTTGTTCATTTGAGCAAGTTGTCTAGTCTCATCCTTAGTAATAATGAGCTTTCTGGCGAGGTTCCAGCTGGAATCGAGTCCTTGAAGCAGCTCAATGAGCTTAGGTTGGCTAACAATAAGTTATCTGGGAACATCCCTGATGGAATTGGGAGTTTGCCAGTGCTTAATTATCTTGATCTTTCCGCCAACTCGCTTTCTGGGGAAATTCCATTCTCCTTGCAGAATTTGAAGCTCAATTTGCTGAATCTATCCTACAATCGACTCTCTGGTGACATTCCTCCCCTTTATGCTAAAAAATATTTTCGAGATAGTTTTGTGGGCAATCCAGGTTTATGTGGTGAGATAGATGGGCTTTGTCCTGGGAATGGTGGAACCGTAAACCTAGAATATTCATGGATACTTCCATCCATTTTTACTCTTGCTGGCATAGTTCTTATTGTTGGGGTTGTTTTGTTCTGCTGGAAGTACAAGAATTTCAAGAAAAATAAGAAAGGAATGGTGATATCCAAGTGGAGATCCTTTCACAAATTGGGTTTCAGTGAGGTTGATATCGTGGATTGCCTTAATGAAGATAATGTGATCGGCAGTGGATCGGCAGGGAAGGTATATAAAGTTGTATTCGCCAATGGTGAAGCAGTTGCAGTGAAGAAACTATGGGGAGGGTCAAAGAAAGATACTGATTCTGAGAAAGATGGATTGGAGAACGACAGGGTGGACAAAGATGGGTTTGAGATTGAAGTTGAAACCTTGGGAAAGATTCGACACAAGAATATCGTTAGGTTATGGTGTTGTTGCAATACTGGGTATTGCAAACTTTTGGTTTACGAATATATGCCAAATGGGAGTTTGGGTGATATGCTGCATAGTAGCAAGGGGGGCTTACTGGACTGGCCAACCAGGTACAAGATAGCCTTGGATGCTGCCGAGGGGCTGTCTTATTTGCATCATGACTGCGTTCCTCCCATTGTTCATAGGGATGTGAAATCAAACAACATATTGCTGGATGGAGAGTTTGGTGCTAGAGTGGCTGATTTTGGAGTTGCTAAAGTTTTCCAGGGGGTCGGAAAGGGGGAAGAGTCCATGTCTGTGATAGTTGGTTCTCGTGGTTACATCGCACCAGAATATGCCTACACTCTTCGAGTGAATGAAAAGAGCGACATTTACAGCTTTGGGGTGGTCATTCTAGAGCTGGTGACAGGTCGACTTCCAGTGGACCCAGAGTTTGGGGAGAAGGATTTGGTGAAATGGGTGTCTGCCTCCTTGGATCAGAAAGGAGGAGAGCATGTCATCGATCCCAGACTCGATTGCAGCTTCAATGAAGAAATTGTCAGGGTCCTAAATGTAGGTCTCCTCTGTACCAACGCACTTCCCATTAACCGCCCTCCAATGCGAAGAGTGGTAAAGATGCTGCAGGAGGCGGGTGCCAGGAACAAGCCCAAGACTACTGCAAAGAAGGATGGGAAGCTTTCTCCTTATTACCATGAAGATGCCTCTAACCACGTGTAG | 2967 | 0.4597 | MILLLLLFLSLPHALSLNQEGLYLLKAKEGLDDPFGALSSWKARDELPCNWKGIVCDSLNRINSVNLSSTGVAGPFPSFLCRLPFLSSIDLSNNSIDSSVAVDFGACQHIKSLNLSDNLLVGSIPASLSRISDLRELVLSGNNFSGEIPASFGEFRRLERLCLAGNLLDGTIPSFLGNISSLKVLELAYNLFRPSQLSPELGNLRNLEVLWISNSNLFGEIPASFGQLTLLTNLDLSSNQLNGSIPSSLSGLSRIVQIELYSNSLSGELPAGMSNWTRLLRLDASMNKLEGPIPEELCGLQLESLSLYQNRFEGFLPESIAGSKNLYELRLFDNRLRGRLPSELGKNSRLNTLDVSSNHFFGEIPANLCANGALEELLMIKNSFSGNIPASLEKCQTLRRVRLSYNQLSGEVPPEIWGLPHVYLLDLSVNSLSGHISNSISGAHNLSSLSISSNQFSGSLPSEIGSLRNLGEFSASQNKITGKIPQTFVHLSKLSSLILSNNELSGEVPAGIESLKQLNELRLANNKLSGNIPDGIGSLPVLNYLDLSANSLSGEIPFSLQNLKLNLLNLSYNRLSGDIPPLYAKKYFRDSFVGNPGLCGEIDGLCPGNGGTVNLEYSWILPSIFTLAGIVLIVGVVLFCWKYKNFKKNKKGMVISKWRSFHKLGFSEVDIVDCLNEDNVIGSGSAGKVYKVVFANGEAVAVKKLWGGSKKDTDSEKDGLENDRVDKDGFEIEVETLGKIRHKNIVRLWCCCNTGYCKLLVYEYMPNGSLGDMLHSSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGARVADFGVAKVFQGVGKGEESMSVIVGSRGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVSASLDQKGGEHVIDPRLDCSFNEEIVRVLNVGLLCTNALPINRPPMRRVVKMLQEAGARNKPKTTAKKDGKLSPYYHEDASNHV* | 989 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi12g0292 | 988 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 765 | 974 | - | - | |
Vvi12g0292 | 988 | FunFam | Receptor-like protein kinase HSL1 | 658 | 764 | - | - | |
Vvi12g0292 | 988 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 17 | 179 | - | - | |
Vvi12g0292 | 988 | MobiDBLite | consensus disorder prediction | 958 | 988 | - | - | |
Vvi12g0292 | 988 | FunFam | Receptor-like protein kinase HSL1 | 301 | 608 | - | - | |
Vvi12g0292 | 988 | SMART | serkin_6 | 675 | 980 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi12g0292 | 988 | Pfam | Protein kinase domain | 677 | 895 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi12g0292 | 988 | Pfam | Leucine rich repeat N-terminal domain | 18 | 57 | IPR013210 | - | |
Vvi12g0292 | 988 | Gene3D | Ribonuclease Inhibitor | 194 | 300 | IPR032675 | - | |
Vvi12g0292 | 988 | Gene3D | Phosphorylase Kinase; domain 1 | 658 | 764 | - | - | |
Vvi12g0292 | 988 | Gene3D | Transferase(Phosphotransferase) domain 1 | 765 | 983 | - | - | |
Vvi12g0292 | 988 | SUPERFAMILY | Protein kinase-like (PK-like) | 669 | 957 | IPR011009 | - | |
Vvi12g0292 | 988 | MobiDBLite | consensus disorder prediction | 965 | 988 | - | - | |
Vvi12g0292 | 988 | Pfam | Leucine rich repeat | 86 | 144 | IPR001611 | GO:0005515 | |
Vvi12g0292 | 988 | SUPERFAMILY | L domain-like | 41 | 300 | - | - | |
Vvi12g0292 | 988 | Gene3D | Ribonuclease Inhibitor | 16 | 192 | IPR032675 | - | |
Vvi12g0292 | 988 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 225 | 959 | - | - | |
Vvi12g0292 | 988 | ProSiteProfiles | Leucine-rich repeat profile. | 564 | 586 | IPR001611 | GO:0005515 | |
Vvi12g0292 | 988 | Gene3D | Ribonuclease Inhibitor | 301 | 606 | IPR032675 | - | |
Vvi12g0292 | 988 | SMART | LRR_typ_2 | 491 | 514 | IPR003591 | - | |
Vvi12g0292 | 988 | SMART | LRR_typ_2 | 515 | 539 | IPR003591 | - | |
Vvi12g0292 | 988 | SMART | LRR_typ_2 | 83 | 107 | IPR003591 | - | |
Vvi12g0292 | 988 | SMART | LRR_typ_2 | 179 | 204 | IPR003591 | - | |
Vvi12g0292 | 988 | SMART | LRR_typ_2 | 228 | 252 | IPR003591 | - | |
Vvi12g0292 | 988 | Pfam | Leucine Rich Repeat | 206 | 227 | IPR001611 | GO:0005515 | |
Vvi12g0292 | 988 | SUPERFAMILY | RNI-like | 210 | 573 | - | - | |
Vvi12g0292 | 988 | FunFam | Leucine-rich receptor-like protein kinase family protein | 197 | 295 | - | - | |
Vvi12g0292 | 988 | ProSiteProfiles | Protein kinase domain profile. | 675 | 980 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi12g0292 | 988 | PRINTS | Leucine-rich repeat signature | 231 | 244 | - | - | |
Vvi12g0292 | 988 | PRINTS | Leucine-rich repeat signature | 539 | 552 | - | - | |
Vvi12g0292 | 988 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 809 | 821 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi12g0292 | Vvi-Chr12 | 3804556 | 3807803 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi12g0292 | 12 | 987 | Receptor kinase-like Gene Family | AT1G28440 | 61.648 | 0.0 | 1184 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vvi12g0292 | Pkinase | 1.1e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi12g0292 | - | - | vvi:100250523 | 1899.02 |