Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0282 ATGATGATACTGGGCTTCATATCCTTGCTTCTTACAATATCCGAAGAAACACCCATATCTAAAATCTGTGTCCCCCAATCCATGGCAAACTCTTTTCTTCCCTGCAAGGATGCACCTGAGATGGTAGGATCAGCTGTTTCATCGGACACAGAAGTCTCAGGATCGACATCCAACACTACTACCCCTCCTACACATGAAACCCCAGATGATGATTCCTACTGTGAGGCAAAAGGAAAGGTTTCTCTGGTGTCAAGAGAAGGGATCGAGCAGCTCAATATCTTTATCTCAGTGTTGGCTGTCTTCCATGTTCTCTACTGTGTACTCACAATGTGTCTTGGGATAGCCAAGATGAGGAAATGGAAAGCATGGGAGAAGGAGACACAAACTCTTGAGTATCAGATTGCCAATGATCCAATGAGGTTCAGGTTCACGCGCCAAACGTCATTTGGGCGACGACACTTGAAGTTCTGGAGTGATTATCCTCTCTTAATTTGGCCTGTTTGTTTGGTTAGACAATTCACTGGCCCAGTTTTGAAAGCTGATTACTTCACTCTCAGAAATGGATTCATCATGGCCCACTTGGCCCAAGGAAGCAATTTCAACTTCCAAAAGTTCCTTTCCAGAGCTTTTGACAAAGATTTTGAGCAGGTGGTTGGATTCAGCTTTTGGATATGGATCTACTCCATACTTTTCATATTTTTCAGTGCACATGGGTTCTATAACTACTATTGGCTACCTTTTATTCCTCTGCTGATTATTCTGGTTGTGGGGACAAAGCTGGGAGTTGTGATAACCACAATGTGTTTGGCGAGTTCTAATGAGAATGATGTGATTCGAGGGACCTTTCTTGTGAAGCCTCATGATGATTTATTCTGGTTTGGAAGACCTAAGTGGCTTCTCCATCTCCTCCAATTTGTCCTATTCCAGAACTCATTTCAGCTGGCATTCTTCGCGTGGACATGGTATGAGTATGGCCTAAGATCTTGCTTCAACCGAGGGACCGAGGACATTGCATTAAGGATTGCTATGGGCGTGGTTGTTCAGTTCCTATGCGGTTATGTGACCCTCCCTCTTTATGCGCTTGTCACACAGATGGGTTCTCAAATGAAACGAGAGGTGTTCACAGAGAGAGTAGCTAAGGGTCTCAGACACTGGCACAGCACTGCAAGGAAAAACCTTTCAAGGGATAGATCCACTTCAACCAGACCCTCACCGAGGACTTCTTTTTCAGATGGACAAACCTTATACTTGCCCCAGCATGACCACCTCCATTCCTCAGCAGCCACGAGTTCTCTTGCAAGCCCTGAAATCTCAGAAGAAACTGTACAGCCCGACACCCCCCCTCCCCCAGCTGAGACAAGCTTCTCAACTAATCCAGAAATCACTGAAGTGGAAGTGCAGTCCAAGATCATCACCAGAGGAAGCTATGACGGTGAGATCTCTTTTGCTAGCACCTGGAAAGTCCAGTAA 1470 0.4551 MMILGFISLLLTISEETPISKICVPQSMANSFLPCKDAPEMVGSAVSSDTEVSGSTSNTTTPPTHETPDDDSYCEAKGKVSLVSREGIEQLNIFISVLAVFHVLYCVLTMCLGIAKMRKWKAWEKETQTLEYQIANDPMRFRFTRQTSFGRRHLKFWSDYPLLIWPVCLVRQFTGPVLKADYFTLRNGFIMAHLAQGSNFNFQKFLSRAFDKDFEQVVGFSFWIWIYSILFIFFSAHGFYNYYWLPFIPLLIILVVGTKLGVVITTMCLASSNENDVIRGTFLVKPHDDLFWFGRPKWLLHLLQFVLFQNSFQLAFFAWTWYEYGLRSCFNRGTEDIALRIAMGVVVQFLCGYVTLPLYALVTQMGSQMKREVFTERVAKGLRHWHSTARKNLSRDRSTSTRPSPRTSFSDGQTLYLPQHDHLHSSAATSSLASPEISEETVQPDTPPPPAETSFSTNPEITEVEVQSKIITRGSYDGEISFASTWKVQ* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0282 489 MobiDBLite consensus disorder prediction 390 413 - -
Vvi12g0282 489 MobiDBLite consensus disorder prediction 427 441 - -
Vvi12g0282 489 MobiDBLite consensus disorder prediction 427 462 - -
Vvi12g0282 489 MobiDBLite consensus disorder prediction 398 413 - -
Vvi12g0282 489 MobiDBLite consensus disorder prediction 46 67 - -
Vvi12g0282 489 Pfam Mlo family 1 406 IPR004326 GO:0006952|GO:0016020
Vvi12g0282 489 PANTHER MLO-LIKE PROTEIN 1 1 437 IPR004326 GO:0006952|GO:0016020
Vvi12g0282 489 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0282 Vvi-Chr12 3714612 3718236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0282 1 403 MLO family AT2G39200 50.483 7.72e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0282 K08472 - vvi:100259221 926.391