Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0266 ATGCTCGACCCAACTTTAACTAAACCCTGGCATTATGTGAGTGCTTGGTTTCAAAATGATGATCCCACTGCGTTCCACACTGCTCATGAGCGGACATTATGGGATTATGCTGGTCCTGAACCTCAGCTCAACAATTTCTTCAATGAAGCCATGGTTAGTGATGCTCGCTTAGTCACCAGCGTGCTGGTTAAGGAGGGAAAGGTCGTATTTGAGGGGTTGAACTCATTAGTTGATGTCAGGGGCGGCACCGGAACTATGGCTAAGGTCATTGCTCACGCTTTCCCATACTTGAACTGCACCGTGTTAGACCTCCCTCATGTAGTTCCTGGCTTGCAAGGGATCAAGAACTTGAACTACTTCACAGGGGATATGTTCGAGGCAGTTCCTCTCGCAGATGCAATTTTACTCAAGTGGATATTGCATGACTGGAGCGATGTGGGGAAGCAATTCGTAGCAACGAAAAGGGAGGAAAGGTGA 477 0.478 MLDPTLTKPWHYVSAWFQNDDPTAFHTAHERTLWDYAGPEPQLNNFFNEAMVSDARLVTSVLVKEGKVVFEGLNSLVDVRGGTGTMAKVIAHAFPYLNCTVLDLPHVVPGLQGIKNLNYFTGDMFEAVPLADAILLKWILHDWSDVGKQFVATKREER* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0266 158 Pfam O-methyltransferase domain 10 145 IPR001077 GO:0008171
Vvi12g0266 158 PANTHER O-METHYLTRANSFERASE 11 145 IPR016461 GO:0008168
Vvi12g0266 158 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 146 IPR029063 -
Vvi12g0266 158 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 158 IPR016461 GO:0008168
Vvi12g0266 158 Gene3D Vaccinia Virus protein VP39 1 152 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0266 Vvi-Chr12 3586999 3588023 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0266 3 145 Monolignol Biosynthesis Gene Families AT5G54160 37.762 1.37e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0266 - K16040 vvi:100263651 270.781