Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0257 ATGAGGAAGGGTTCGAAGAGTAATTGCAAATCTGCATCACACCAACTTTTCAAGGACAAGGCAAAAAACCGGGTTGATGATCTCCAAGGGATGTTCACCAATCTTCAATTTGCTAGGAAGGAGAGTCGAACCAGTGATGTTGCAGTGTTGGAGGAGCAAGTGCATCAGATGCTTCGCGAGTGGAAAGCTGAGCTCAATGAGCCGTCTCCAGCTTCTTCTTTGCTTGGTGGTAGTCTTGGGTCATTTTCAGCAGATATTAACCGTTTGTTGCAGCGCTGTGAGGAGGAAGATGATGCAACTAGTGCATTAGTAGAACCTGCAGCATTGAAGCCTGAGCCTGATGTTCAAAGTCTTCAGGCAGGCAATTCGATGGCCTTTCAAGAGGACTATCTCGTGAATCATGCATCACAAGACCATTGCCTTCTGGGGTTTGATCAATGCAAAGGCTCTGCATTTGGGTTGCAAAATACAGTGGCTAATAACTTGGAGATGACAACTCAGTCAGATTATAATCAGTTTGATATGCATCAAGACTTTGACCATGAGCTTTTTATTGGCCCCATGGGGCTGTGTGGACAGGATGGTGTGCCCAACATTCCTGGCTTGTTGCCAAACATCTGCCCTCCACCATCTGCTTTCTTAGGGCCAAAATGTGCTCTCTGGGATTGTCCCAGGCCTGCTCAAGGTTCTGAATGGTGTCAGGATTATTGCAGTAGCTTTCATGCGAGTCTAGCATTAAATGAAGGCCCCCCAGGTATGACTCCAGTTCTGCGACCTGGGGGCATTGGTTTGAAGGATGGTCCTCTATTTGCTGCACTTAGTGCAAAGACACAGGGAAAGGATGTTGGCATCCCTGAATGTGAGGGGGCTGCAACTTCGAAATCTCCATGGAATGCTCCTGAGTTGTTTGATCTTTCTGTTCTTGAAGGTGAAATAATTAGGGAGTGGCTCTTTTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCAGATTACAGTGGACGTGGTTGGCATGAATCAAGGAAACAAGTGATGAAGGAATTTGGGGGATTGAAGAGGTCTTATTACATGGATCCGCAACCTCTAACCTGTTTTGAGTGGCATCTTTATGAATATGAGATCAACCACTGTGATGCTTGTGCATTATATAGGTTAGAACTCAAGCTCGTTGATGGAAAGAAGAGTCCCAAGGGAAAGGTGATAAATGATTCACTTGCTGATCTGCAGAAGCAGATGGGAAGGCTTACTGCTGAGTTTCCTACTGATGTCAAACGCTCTACCAAGGGCAGGACAAAGGTTAATAAAAAGGTTGGTGCCAGAAATATTTATTCTGCTCCTAATCTCATGACTCCTACAGCTGAAACTTTCAGTTATGGGCTAAGTGGATCATACAATTATCTTCCTGAGAATTTGGCTGACTATTATGGTAAATAA 1455 0.4495 MRKGSKSNCKSASHQLFKDKAKNRVDDLQGMFTNLQFARKESRTSDVAVLEEQVHQMLREWKAELNEPSPASSLLGGSLGSFSADINRLLQRCEEEDDATSALVEPAALKPEPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQNTVANNLEMTTQSDYNQFDMHQDFDHELFIGPMGLCGQDGVPNIPGLLPNICPPPSAFLGPKCALWDCPRPAQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKDVGIPECEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLELKLVDGKKSPKGKVINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKVGARNIYSAPNLMTPTAETFSYGLSGSYNYLPENLADYYGK* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0257 484 PANTHER TRANSCRIPTION FACTOR VOZ1 1 478 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0257 Vvi-Chr12 3463527 3470101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0257 3 482 VOZ-9 Transcription Factor Family AT1G28520 66.869 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vvi12g0257 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0257 - - vvi:100262658 993.416