Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0158 ATGATGTCAAGATCGTATACCAATCTTTTAGATTTAGCTACTGGGAATTTTCCGGCAATCGGTCGAGAACGGAAGCGGCTTCCGAGGGTAATGACGGTTCCGGGCAATGTGTATGAACTTGATGATGATCAGGCTAATAGTGTGTCGTCTGATAACCCCTCTTCAGTTGCTCAAGATCGGTTGATTATAGTGGCAAACCAGTTGCCTGTGAAAGCTAACCGAAGAGCAGATGATAGAGGCTGGGTTTTTAGTTGGAATGAAGACTCATTGCTTCTGCAACTTAAGGAGGGTTTGCCAGAAGACATGGAAGTTCTGTATGTTGGGTCATTGAGGGTTGATGTTGACTTGGAGGAACAAGAGGAAGTATCCCAGATTCTGTTGGAGACATTCAAATGTGTCCCTACTTTTCTGCCTCATGATGTTTTAGAGAAATTCTATCATGGATTCTGCAAGAAGTTGTTATGGCCGCTTTTCCATTACATGTTGCCATTTTCAGCTGATCATGGAGGTCGGTTTGATCGGTCTATGTGGGAAGCATATGTGTTGGCAAATAAGTTATTCTCACAAAAGGTTATTGAGGTGATAAACCCAGATGATGATTATGTTTGGATTCATGATTACCATTTGATGGTATTGCCAACTTTCTTGAGGAGGCACTTTAACCAGTTAAGAATGGGTTTTTTTCTTCATAGTCCATTTCCATCTTCAGAGATCTACAGGACTCTTCCTGTCAGAGAAGAAATTCTTAAGGCTTTGCTTAACTCAGACCTTATTGGTTTCCACACATTTGATTATGCTCGGCATTTCCTTTCTTGTTGCAGTCGGATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGCTATATAGGGTTGGAATATTATGGAAGGACTGTGGGGATCAAGATTATGCCTGTTGGGATTCATATGGGCCGGATTGCTTCAGTGATGAAGCTTGCAGACAAGCAGAAGAAGGTAGGAGAGCTCAAGCAGCAGTTTGAAGGGAAAACGGTGTTGCTTGGTGTTGATGATATGGACATTTTTAAAGGTATTAATTTGAAGCTATTGGCAATGGAACAGTTGCTTCAGCAACACTCAAAGTGGCAAGGAAAGGCCGTGTTGGTTCAGATTGCAAACCCTGCAAGAGGTAAAGGAGCAGATTTAGAGGAAATACAAGCTGAAATAAGGGAAAGCTGCAGAAGAATCAATGAAGAATTTGGGGAGCCCGGGTATGAACCAATAGTTTTTGTTGACAGACCAGTTTCAATCAGTGAGAGAATTGCCTATTACAGTATTGCTGCGTGTGTTGTTGTCACGGCTGTCAGGGATGGGATGAACCTTACTCCGTATGAATACATTGTTTGTAGACAAGGAACAGATGATTCTGAATCAAGTTCGGATTTGAGTGGGCCCAAGAAGAGCATGCTAGTGCTATCAGAATTTATTGGATGCTCTCCTTCACTTAGTGGGGCTATCCGTGTGAATCCATGGAATGTCGAAGCAACTGCTGAGGCAATGAATGAAGCTATTTCAATGTCTCAATCAGAGCAACTCCTGCGACATGAGAAGCATTTTCGGTATGTTAGCACCCATGATGTGGCTTATTGGTCACGAAGCTTCTTGCAAGATATGGAGAGAACCTGCTCAGAGCACTTTAGGAGAAGATGCTGGGGAATTGGTTTAAGTTTTGGGTTCAGAGTTGTAGCACTTGATCCTAATTTTAGAAAGCTTTCAATGGAGGCTATTGTTTCGGCCTACTGTAGGGCTAAGAGTAGGGCCATACTGTTGGACTATGATGGCACTGTGATGCCCCAAAATTCCATCAACAAGGCTCCAAGTCAGGAGGTTATTTCAATTCTAAACACACTTTGCTGGGACAAGAAAAATACAGTTTTTATTGTCAGTGGAAGAGGAAGGGATAACTTAAGCCAGTGGTTTTCCCCCTGCAGGAAGCTTGGACTTGCAGCAGAACATGGTTACTTCTTAAGGTGGTCACAAGATAAAGAATGGGAAACCTGTGGTCAGAGTTCTGATTTTGGGTGGAAGCAAATTGCTGAACCTGTGATGAAGTTGTACACTGAGACTACTGATGGGTCTTCCATTGAAAGTAAAGAGAGTGCTCTGGTTTGGCAATATGGGGATGCGGACCCAGGCTTTGGATCCTCTCAGGCAAAGGAAATGTTGGATCATCTAGAGAGTGTATTAGCAAATGAACCTGTTGCTGTCAAAAGTGGTCATTTTATTGTAGAAGTTAAGCCTCAGGGAGTTAGCAAAGGCCTAGCTGCAGAAAAGATCTTCACCACAATGACTGAAAATGGAAAACAAGCTGATTTTTTGCTTTGTATTGGAGATGACAGATCTGATGAGGACATGTTTGAAATAATTGGTAGTGCAATGTCAACAAATATTCTTTCTGCCAACACTTCATTGTTTGCATGCACGGTAGGGCAAAAGCCCAGCAAAGCTAAATATTATTTGGATGACGCAAGCGAAGTGATATGCATGCTTGAGTCACTTGCTGAAGCCTCTGATTCTGGACCATCCTCTGAAGAAGAAACTCAGGTCTCCCCTTGA 2568 0.4272 MMSRSYTNLLDLATGNFPAIGRERKRLPRVMTVPGNVYELDDDQANSVSSDNPSSVAQDRLIIVANQLPVKANRRADDRGWVFSWNEDSLLLQLKEGLPEDMEVLYVGSLRVDVDLEEQEEVSQILLETFKCVPTFLPHDVLEKFYHGFCKKLLWPLFHYMLPFSADHGGRFDRSMWEAYVLANKLFSQKVIEVINPDDDYVWIHDYHLMVLPTFLRRHFNQLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGRIASVMKLADKQKKVGELKQQFEGKTVLLGVDDMDIFKGINLKLLAMEQLLQQHSKWQGKAVLVQIANPARGKGADLEEIQAEIRESCRRINEEFGEPGYEPIVFVDRPVSISERIAYYSIAACVVVTAVRDGMNLTPYEYIVCRQGTDDSESSSDLSGPKKSMLVLSEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMSQSEQLLRHEKHFRYVSTHDVAYWSRSFLQDMERTCSEHFRRRCWGIGLSFGFRVVALDPNFRKLSMEAIVSAYCRAKSRAILLDYDGTVMPQNSINKAPSQEVISILNTLCWDKKNTVFIVSGRGRDNLSQWFSPCRKLGLAAEHGYFLRWSQDKEWETCGQSSDFGWKQIAEPVMKLYTETTDGSSIESKESALVWQYGDADPGFGSSQAKEMLDHLESVLANEPVAVKSGHFIVEVKPQGVSKGLAAEKIFTTMTENGKQADFLLCIGDDRSDEDMFEIIGSAMSTNILSANTSLFACTVGQKPSKAKYYLDDASEVICMLESLAEASDSGPSSEEETQVSP* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0158 855 FunFam Uncharacterized protein 52 315 - -
Vvi12g0158 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 546 - -
Vvi12g0158 855 Gene3D Glycogen Phosphorylase B; 52 313 - -
Vvi12g0158 855 FunFam Trehalose-6-phosphate synthase 2 673 752 - -
Vvi12g0158 855 Gene3D Glycogen Phosphorylase B; 314 527 - -
Vvi12g0158 855 NCBIfam trehalose-phosphatase 587 838 IPR003337 GO:0003824|GO:0005992
Vvi12g0158 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 839 IPR001830 GO:0003824|GO:0005992
Vvi12g0158 855 Pfam Trehalose-phosphatase 593 827 IPR003337 GO:0003824|GO:0005992
Vvi12g0158 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Vvi12g0158 855 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 851 - -
Vvi12g0158 855 NCBIfam HAD-IIB family hydrolase 592 796 IPR006379 -
Vvi12g0158 855 CDD HAD_TPP 591 830 - -
Vvi12g0158 855 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Vvi12g0158 855 SUPERFAMILY HAD-like 590 838 IPR036412 -
Vvi12g0158 855 Gene3D - 716 852 IPR023214 -
Vvi12g0158 855 Gene3D - 589 712 IPR023214 -
Vvi12g0158 855 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Vvi12g0158 855 FunFam Alpha,alpha-trehalose-phosphate synthase 316 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0158 Vvi-Chr12 2329761 2333082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0158 1 850 Trehalose Biosynthesis Gene Families AT1G06410 78.941 0.0 1402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0158 K16055 - vvi:100255689 1726.45