Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0140 ATGGAAATAGCAAAAAATGCCAAAAAGTTATGGGAAAAGACACTGCTTTGGAAGCGAACTGAGCTGCTTCACAAGGCAGTTGCTATCCTCAAAGAACACAAAGCCCTAATTGCAGAGGGCCTGGTGAAAGAAATTGCAAAGCCAGCCAAGGATGCAGTTACTGAGGGTGTGAAGCTGGGGATTTTGACAGTGGGTTTCCCAAAGTTTCCAGTCCTGTTGGTTCTACTTCAGATGGACGACATTCAAGACCAGGCTGGAACTTGA 264 0.4583 MEIAKNAKKLWEKTLLWKRTELLHKAVAILKEHKALIAEGLVKEIAKPAKDAVTEGVKLGILTVGFPKFPVLLVLLQMDDIQDQAGT* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0140 87 PANTHER ALDEHYDE DEHYDROGENASE 1 59 - -
Vvi12g0140 87 SUPERFAMILY ALDH-like 2 55 IPR016161 GO:0016491
Vvi12g0140 87 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 66 IPR016162 GO:0016491
Vvi12g0140 87 Pfam Aldehyde dehydrogenase family 2 56 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0140 Vvi-Chr12 2167459 2167722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0140 1 62 Aldehyde Dehydrogenase Gene Family AT2G24270 70.968 2.68e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0140 K00131 - csv:101208699 95.1301