Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0129 ATGGACGACCTACTTAAGAGCATCCACGGTGACAACCTCCCCCTGGAGAGTTTCTCGACGACGGCGGCGGGGAACAGCAGAGACGGGGTTGGCGGGGGAGGAGAGGGAGGGTCGCTGTCGCGGCAGGGGAGCTTCTCGCTGCTGAAAAGCATGGGGAACAAGACTGTGGATGAGTTGTTTAAGGAGAGCGTGGCGTCGAGTGATCAGAGGCGGGGAGGTGCAGGGGAGGATCTGGAGTGTATGACTCTGGAGGAGTTTCTGACCAAGGCTGGGGTAGTGAGAAAGGAAGATGTGAGGATTCCGGTGACGGGCGGAGCAGGGAGTAACAGTGTGGATGTGATAATGAACGGACAGTTTCAGGCGCCGCAGATGCAATCGCAGAGTGTTGATGGCGCAACGGTGGCCTTTGGGAATGGCATTGATGGAAGAGTTATTGGTGCTGAAAGAGGGCAGAGGACAGTGGTGGAGGACCCGGTGGATAAGGCTACGCAGCAAAAAGCAGCGGCGGATGATCAAGAATAG 522 0.5709 MDDLLKSIHGDNLPLESFSTTAAGNSRDGVGGGGEGGSLSRQGSFSLLKSMGNKTVDELFKESVASSDQRRGGAGEDLECMTLEEFLTKAGVVRKEDVRIPVTGGAGSNSVDVIMNGQFQAPQMQSQSVDGATVAFGNGIDGRVIGAERGQRTVVEDPVDKATQQKAAADDQE* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0129 173 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 166 IPR043452 GO:0003700|GO:0045893
Vvi12g0129 173 MobiDBLite consensus disorder prediction 148 173 - -
Vvi12g0129 173 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0129 Vvi-Chr12 2037102 2037623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0129 1 96 bZIP Transcription Factor Family AT4G34000 35.556 1.19e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0129 K14432 - vvi:104880856 300.827