Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0086 ATGGTGGTGAAGGTGTATGGCCCAGCCTTTGCTTGTCCAAAGCGTGTCCTTATTTGCCTTGTTGAGAAGGAGATTGAGTTTGAGACTGTCCCAGTTGATATCATCAAAGGAGAGCACAAGGATCCTGAATACCTCAAGTTACAGCCTTTTGGAGTGGTTCCTGTCATTCAAGATGGAGATTATACTTTATATGAATCAAGAGCTATCATAAGGTACTATGCAGAGAAGTACAAGTCTCAAGGAACTGATTTGCTTGGGAAGACAATAGAGGAAAGGGGTACTGTGGAGCAGTGGCTAGAGGTTGAAGCACAAAACTACCACCCACCAATATACAATTTAGTTCTTCACGTTCTGTTCAGTGACAAGATGGGGTTTCCTGCAGATGCAAAAGTGATTGAAGAGAGTGAGAAAAATCTTGGGAAAGTGTTGGACATTTACGAGGAGAGGCTGTCTAAGAGCAAGTACTTGGCTGGGGACTTCTTTAGCCTTGCTGATCTCAGCCACATTCCTTTCACTAACTACTTGGGTGCTATGGGCAAGATGTATTTGATTAAGGAGAGAGAGCATGTGAGTGCATGGTGGGATGATATTAGTAGCAGGCCATCTTGGAAAAAGGTCCTTGAGCTCTACCCTGCCCCAATCTTGGAATAA 651 0.4393 MVVKVYGPAFACPKRVLICLVEKEIEFETVPVDIIKGEHKDPEYLKLQPFGVVPVIQDGDYTLYESRAIIRYYAEKYKSQGTDLLGKTIEERGTVEQWLEVEAQNYHPPIYNLVLHVLFSDKMGFPADAKVIEESEKNLGKVLDIYEERLSKSKYLAGDFFSLADLSHIPFTNYLGAMGKMYLIKEREHVSAWWDDISSRPSWKKVLELYPAPILE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0086 216 Gene3D - 86 207 - -
Vvi12g0086 216 SUPERFAMILY GST C-terminal domain-like 83 206 IPR036282 -
Vvi12g0086 216 CDD GST_N_Phi 2 76 - -
Vvi12g0086 216 Pfam Glutathione S-transferase, C-terminal domain 122 201 IPR004046 -
Vvi12g0086 216 FunFam Glutathione S-transferase F2 86 207 - -
Vvi12g0086 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 208 - -
Vvi12g0086 216 FunFam Glutathione S-transferase F2 2 85 - -
Vvi12g0086 216 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Vvi12g0086 216 SFLD Main (cytGST) 4 200 - -
Vvi12g0086 216 Gene3D Glutaredoxin 1 85 - -
Vvi12g0086 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Vvi12g0086 216 SFLD Glutathione Transferase (cytosolic) 4 200 IPR040079 -
Vvi12g0086 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Vvi12g0086 216 Pfam Glutathione S-transferase, N-terminal domain 2 74 IPR004045 -
Vvi12g0086 216 CDD GST_C_Phi 90 207 IPR034347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0086 Vvi-Chr12 1438789 1439921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0086 1 214 Glutathione S-transferase Gene Family AT2G30870 63.256 4.56e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0086 K00799 - vvi:100233043 442.965