Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0085 ATGAGGTACTATGCTGAGAAGTACAAGTCTCAAGGAACTGATTTACTGGGGAAGACAATAGAGGAGAGGGGAGTGGTGGAACAATGGCTGGAGGTTGAAGCACAAAGTTACCACCCAGCAATTGACAATTTAGTCATTGAAATTCTGTTTGGCCGCAAACGGGGTATTCCCCCAGATGCGAAAGTGATCGAAGAGAGTGAAAAGAAGCTTGCAAAGGTGTTGGACATCTATGAAGAGAGGCTGTCCAAGAGCAAGTACCTGGCTGGGGATTTCTTTAGCCTTGCTGATCTTAGCCACCTTCCATTCACAAAGTACTTGGCTGATATGGGGAAGATGTATTTGATTGAGGAGAGGAAACACGTGAAGGCATGGTGGGATGATATCAGTAATAGACCATCCTGGAAGAAGGTCTTCAGCTCTAGATGGCCCCTCTTGGAGTGA 441 0.4626 MRYYAEKYKSQGTDLLGKTIEERGVVEQWLEVEAQSYHPAIDNLVIEILFGRKRGIPPDAKVIEESEKKLAKVLDIYEERLSKSKYLAGDFFSLADLSHLPFTKYLADMGKMYLIEERKHVKAWWDDISNRPSWKKVFSSRWPLLE* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0085 146 CDD GST_C_Phi 21 137 IPR034347 -
Vvi12g0085 146 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 139 - -
Vvi12g0085 146 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 19 146 IPR010987 -
Vvi12g0085 146 FunFam Glutathione S-transferase F2 17 138 - -
Vvi12g0085 146 SUPERFAMILY GST C-terminal domain-like 3 143 IPR036282 -
Vvi12g0085 146 Pfam Glutathione S-transferase, C-terminal domain 57 132 IPR004046 -
Vvi12g0085 146 Gene3D - 17 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0085 Vvi-Chr12 1434464 1434904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0085 1 144 Glutathione S-transferase Gene Family AT2G30870 64.828 1.88e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0085 K00799 - vvi:100233042 300.056